Ritambhara Singh

Orcid: 0000-0002-7523-160X

According to our database1, Ritambhara Singh authored at least 54 papers between 2016 and 2026.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Book  In proceedings  Article  PhD thesis  Dataset  Other 

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Online presence:

On csauthors.net:

Bibliography

2026
Handling and Interpreting Missing Modalities in Patient Clinical Trajectories via Autoregressive Sequence Modeling.
CoRR, April, 2026

Is There Knowledge Left to Extract? Evidence of Fragility in Medically Fine-Tuned Vision-Language Models.
CoRR, April, 2026

UbuntuGuard: A Culturally-Grounded Policy Benchmark for Equitable AI Safety in African Languages.
CoRR, January, 2026

The Persona Paradox: Medical Personas as Behavioral Priors in Clinical Language Models.
CoRR, January, 2026

Mechanisms of Prompt-Induced Hallucination in Vision-Language Models.
CoRR, January, 2026

Identifying and timing patient outcomes in clinician notes using large language models.
Artif. Intell. Medicine, 2026

2025
PiCME: Pipeline for Contrastive Modality Evaluation and Encoding in the MIMIC Dataset.
CoRR, July, 2025

Forgotten Polygons: Multimodal Large Language Models are Shape-Blind.
CoRR, February, 2025

GrapHiC: An Integrative Graph Based Approach for Imputing Missing Hi-C Reads.
IEEE Trans. Comput. Biol. Bioinform., 2025

Optimal transport reveals dynamic gene regulatory networks via gene velocity estimation.
PLoS Comput. Biol., 2025

Machine learning on multiple epigenetic features reveals H3K27Ac as a driver of gene expression prediction across patients with glioblastoma.
PLoS Comput. Biol., 2025

What Do VLMs NOTICE? A Mechanistic Interpretability Pipeline for Gaussian-Noise-free Text-Image Corruption and Evaluation.
Proceedings of the 2025 Conference of the Nations of the Americas Chapter of the Association for Computational Linguistics: Human Language Technologies, 2025

K-Paths: Reasoning over Graph Paths for Drug Repurposing and Drug Interaction Prediction.
Proceedings of the 31st ACM SIGKDD Conference on Knowledge Discovery and Data Mining, V.2, 2025

Pixels Versus Priors: Controlling Knowledge Priors in Vision-Language Models through Visual Counterfacts.
Proceedings of the 2025 Conference on Empirical Methods in Natural Language Processing, 2025

scMultiNODE: Integrative and Scalable Framework for Multi-Modal Temporal Single-Cell Data.
Proceedings of the 16th ACM International Conference on Bioinformatics, 2025

Improved Spatial Transcriptomics Clustering with Nested Graph Neural Networks.
Proceedings of the 16th ACM International Conference on Bioinformatics, 2025

Extending Fairness in Single-Cell AI: Evaluating Age, Sex, and Ethnicity Bias with Synthetic Data Augmentation.
Proceedings of the 16th ACM International Conference on Bioinformatics, 2025

Forgotten Polygons: Multimodal Large Language Models are Shape-Blind.
Proceedings of the Findings of the Association for Computational Linguistics, 2025

2024
BetaExplainer: A Probabilistic Method to Explain Graph Neural Networks.
CoRR, 2024

What Do VLMs NOTICE? A Mechanistic Interpretability Pipeline for Noise-free Text-Image Corruption and Evaluation.
CoRR, 2024

On the Effect of Image Resolution on Semantic Segmentation.
CoRR, 2024

<tt> scNODE </tt>: generative model for temporal single cell transcriptomic data prediction.
Bioinform., 2024

scGrapHiC: deep learning-based graph deconvolution for Hi-C using single cell gene expression.
Bioinform., 2024

Retrieval Augmented Zero-Shot Text Classification.
Proceedings of the 2024 ACM SIGIR International Conference on Theory of Information Retrieval, 2024

Breaking isometric ties and introducing priors in Gromov-Wasserstein distances.
Proceedings of the International Conference on Artificial Intelligence and Statistics, 2024

2023
Revisiting invariances and introducing priors in Gromov-Wasserstein distances.
CoRR, 2023

One-Versus-Others Attention: Scalable Multimodal Integration.
CoRR, 2023

Unbalanced CO-optimal Transport.
Proceedings of the Thirty-Seventh AAAI Conference on Artificial Intelligence, 2023

2022
An automated COVID-19 triage pipeline using artificial intelligence based on chest radiographs and clinical data.
npj Digit. Medicine, 2022

Single-Cell Multiomics Integration by SCOT.
J. Comput. Biol., 2022

SCOT: Single-Cell Multi-Omics Alignment with Optimal Transport.
J. Comput. Biol., 2022

SCOTv2: Single-Cell Multiomic Alignment with Disproportionate Cell-Type Representation.
J. Comput. Biol., 2022

Integrating Long-Range Regulatory Interactions to Predict Gene Expression Using Graph Convolutional Networks.
J. Comput. Biol., 2022

Multimodal attention-based deep learning for Alzheimer's disease diagnosis.
J. Am. Medical Informatics Assoc., 2022

Unsupervised Integration of Single-Cell Multi-omics Datasets with Disproportionate Cell-Type Representation.
Proceedings of the Research in Computational Molecular Biology, 2022

2021
TIMEOR: a web-based tool to uncover temporal regulatory mechanisms from multi-omics data.
Nucleic Acids Res., 2021

A Joint Graph and Image Convolution Network for Automatic Brain Tumor Segmentation.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2021

2020
FastSK: fast sequence analysis with gapped string kernels.
Bioinform., 2020

Exploring Graph-Based Neural Networks for Automatic Brain Tumor Segmentation.
Proceedings of the From Data to Models and Back - 9th International Symposium, 2020

Unsupervised manifold alignment for single-cell multi-omics data.
Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020

2019
Transfer String Kernel for Cross-Context DNA-Protein Binding Prediction.
IEEE ACM Trans. Comput. Biol. Bioinform., 2019

Jointly Embedding Multiple Single-Cell Omics Measurements.
Proceedings of the 19th International Workshop on Algorithms in Bioinformatics, 2019

2018
DeepDiff: DEEP-learning for predicting DIFFerential gene expression from histone modifications.
Bioinform., 2018

2017
A constrained $$\ell $$ ℓ 1 minimization approach for estimating multiple sparse Gaussian or nonparanormal graphical models.
Mach. Learn., 2017

Prototype Matching Networks for Large-Scale Multi-label Genomic Sequence Classification.
CoRR, 2017

Deep Motif Dashboard: Visualizing and Understanding Genomic Sequences Using Deep Neural Networks.
Proceedings of the Biocomputing 2017: Proceedings of the Pacific Symposium, 2017

GaKCo: A Fast Gapped k-mer String Kernel Using Counting.
Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2017

Attend and Predict: Understanding Gene Regulation by Selective Attention on Chromatin.
Proceedings of the Advances in Neural Information Processing Systems 30: Annual Conference on Neural Information Processing Systems 2017, 2017

Memory Matching Networks for Genomic Sequence Classification.
Proceedings of the 5th International Conference on Learning Representations, 2017

2016
A constrained L1 minimization approach for estimating multiple Sparse Gaussian or Nonparanormal Graphical Models.
CoRR, 2016

Deep GDashboard: Visualizing and Understanding Genomic Sequences Using Deep Neural Networks.
CoRR, 2016

Deep Motif: Visualizing Genomic Sequence Classifications.
CoRR, 2016

DeepChrome: deep-learning for predicting gene expression from histone modifications.
Bioinform., 2016

Character based String Kernels for Bio-Entity Relation Detection.
Proceedings of the 15th Workshop on Biomedical Natural Language Processing, 2016


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