Erica Larschan

According to our database, Erica Larschan authored at least 7 papers between 2007 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

Optimal transport reveals dynamic gene regulatory networks via gene velocity estimation.

Wenjun Zhao, Erica Larschan, Björn Sandstede, Ritambhara Singh

PLoS Comput. Biol., 2025

2024

<tt> scNODE </tt>: generative model for temporal single cell transcriptomic data prediction.

Jiaqi Zhang, Erica Larschan, Jeremy Bigness, Ritambhara Singh

Bioinform., 2024

BindCompare: a novel integrated protein-nucleic acid binding analysis platform.

Pranav Mahableshwarkar, Jasmine Shum, Mukulika Ray, Erica Larschan

Bioinform., 2024

2022

Integrating Long-Range Regulatory Interactions to Predict Gene Expression Using Graph Convolutional Networks.

Jeremy Bigness, Xavier Loinaz, Shalin Patel, Erica Larschan, Ritambhara Singh

J. Comput. Biol., 2022

2021

TIMEOR: a web-based tool to uncover temporal regulatory mechanisms from multi-omics data.

Ashley Mae Conard, Nathaniel Goodman, Yanhui Hu, Norbert Perrimon, Ritambhara Singh, Charles Lawrence, Erica Larschan

Nucleic Acids Res., 2021

2014

Comparative analysis of metazoan chromatin organization Open.

Joshua Wing Kei Ho, Youngsook L. Jung, Tao Liu, Burak Han Alver, Soohyun Lee, Kohta Ikegami, Kyung-Ah Sohn, Aki Minoda, Michael Y. Tolstorukov, Alex Appert, Stephen C. J. Parker, Tingting Gu, Anshul Kundaje, Nicole C. Riddle, Eric Bishop, Thea A. Egelhofer, Sheng'en Shawn Hu, Artyom A. Alekseyenko, Andreas Rechtsteiner, Dalal Asker, Jason A. Belsky, Sarah K. Bowman, Q. Brent Chen, Ron A.-J. Chen, Daniel S. Day, Yan Dong, Andrea C. Dose, Xikun Duan, Charles B. Epstein, Sevinc Ercan, Elise A. Feingold, Francesco Ferrari, Jacob M. Garrigues, Nils Gehlenborg, Peter J. Good, Psalm Haseley, Daniel He, Moritz Herrmann, Michael M. Hoffman, Tess E. Jeffers, Peter V. Kharchenko, Paulina Kolasinska-Zwierz, Chitra V. Kotwaliwale, Nischay Kumar, Sasha A. Langley, Erica Larschan, Isabel Latorre, Maxwell W. Libbrecht, Xueqiu Lin, Richard Park, Michael J. Pazin, Hoang N. Pham, Annette Plachetka, Bo Qin, Yuri B. Schwartz, Noam Shoresh, Przemyslaw Stempor, Anne Vielle, Chengyang Wang, Christina M. Whittle, Huiling Xue, Robert E. Kingston, Ju Han Kim, Bradley E. Bernstein, Abby F. Dernburg, Vincenzo Pirrotta, Mitzi I. Kuroda, William S. Noble, Thomas D. Tullius, Manolis Kellis, David M. MacAlpine, Susan Strome, Sarah C. R. Elgin, Xiaole Shirley Liu, Jason D. Lieb, Julie Ahringer, Gary H. Karpen, Peter J. Park

Nat., 2014

2007

Normalization and experimental design for ChIP-chip data.

Shouyong Peng, Artyom A. Alekseyenko, Erica Larschan, Mitzi I. Kuroda, Peter J. Park

BMC Bioinform., 2007