Sabrina de Azevedo Silveira

According to our database, Sabrina de Azevedo Silveira authored at least 16 papers between 2012 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

GRaSP-web: a machine learning strategy to predict binding sites based on residue neighborhood graphs.

Charles Abreu Santana, Sandro C. Izidoro, Raquel Cardoso de Melo Minardi, Jonathan D. Tyzack, António J. M. Ribeiro, Douglas E. V. Pires, Janet M. Thornton, Sabrina de Azevedo Silveira

Nucleic Acids Res., 2022

Protein structural bioinformatics: An overview.

Vinícius de Almeida Paiva, Isabela de Souza Gomes, Cleiton Rodrigues Monteiro, Murillo Ventura Mendonça, Pedro Magalhães Martins, Charles Abreu Santana, Valdete M. Gonçalves-Almeida, Sandro Carvalho Izidoro, Raquel Cardoso de Melo Minardi, Sabrina de Azevedo Silveira

Comput. Biol. Medicine, 2022

GASS-Metal: identifying metal-binding sites on protein structures using genetic algorithms.

Vinícius de Almeida Paiva, Murillo Ventura Mendonça, Sabrina de Azevedo Silveira, David B. Ascher, Douglas E. V. Pires, Sandro C. Izidoro

Briefings Bioinform., 2022

2021

Propedia: a database for protein-peptide identification based on a hybrid clustering algorithm.

Pedro M. Martins, Lucianna Helene Santos, Diego C. B. Mariano, Felippe C. Queiroz, Luana L. Bastos, Isabela de Souza Gomes, Pedro H. C. Fischer, Rafael E. O. Rocha, Sabrina de Azevedo Silveira, Leonardo H. F. de Lima, Mariana T. Q. de Magalhães, Maria G. A. Oliveira, Raquel Cardoso de Melo Minardi

BMC Bioinform., 2021

2020

nAPOLI: A Graph-Based Strategy to Detect and Visualize Conserved Protein-Ligand Interactions in Large-Scale.

Alexandre V. Fassio, Lucianna Helene Santos, Sabrina de Azevedo Silveira, Rafaela Salgado Ferreira, Raquel Cardoso de Melo Minardi

IEEE ACM Trans. Comput. Biol. Bioinform., 2020

ppiGReMLIN: a graph mining based detection of conserved structural arrangements in protein-protein interfaces.

Felippe C. Queiroz, Adriana M. P. Vargas, Maria G. A. Oliveira, Giovanni V. Comarela, Sabrina de Azevedo Silveira

BMC Bioinform., 2020

2019

A Hierarchical and Scalable Strategy for Protein Structural Classification.

Vinício F. Mendes, Cleiton Rodrigues Monteiro, Giovanni V. Comarela, Sabrina de Azevedo Silveira

Proceedings of the Bioinformatics and Biomedical Engineering, 2019

Protein Structural Signatures Revisited: Geometric Linearity of Main Chains are More Relevant to Classification Performance than Packing of Residues.

João Arthur F. Gadelha Campelo, Cleiton Rodrigues Monteiro, Carlos Henrique da Silveira, Sabrina de Azevedo Silveira, Raquel Cardoso de Melo Minardi

Proceedings of the Bioinformatics and Biomedical Engineering, 2019

2018

How to compute protein residue contacts more accurately?

Pedro M. Martins, Vinícius D. Mayrink, Sabrina de Azevedo Silveira, Carlos Henrique da Silveira, Leonardo H. F. de Lima, Raquel Cardoso de Melo Minardi

Proceedings of the 33rd Annual ACM Symposium on Applied Computing, 2018

An Interactive Strategy to Visualize Common Subgraphs in Protein-Ligand Interaction.

Alexandre V. Fassio, Charles Abreu Santana, Fabio Ribeiro Cerqueira, Carlos Henrique da Silveira, João P. R. Romanelli, Raquel Cardoso de Melo Minardi, Sabrina de Azevedo Silveira

Proceedings of the Bioinformatics and Biomedical Engineering, 2018

Using supervised learning successful descriptors to perform protein structural classification through unsupervised learning.

Cleiton Monteiro, Vinício F. Mendes, Giovanni Comarela, Sabrina de Azevedo Silveira

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017

Vermont: a multi-perspective visual interactive platform for mutational analysis.

Alexandre V. Fassio, Pedro M. Martins, Samuel da S. Guimarães, Sócrates S. A. Junior, Vagner S. Ribeiro, Raquel Cardoso de Melo Minardi, Sabrina de Azevedo Silveira

BMC Bioinform., 2017

CALI: A Novel Visual Model for Frequent Pattern Mining in Protein-Ligand Graphs.

Susana Medina G., Alexandre Victor Fassio, Sabrina de Azevedo Silveira, Carlos Henrique da Silveira, Raquel Cardoso de Melo Minardi

Proceedings of the 17th IEEE International Conference on Bioinformatics and Bioengineering, 2017

2016

GReMLIN: A Graph Mining Strategy to Infer Protein-Ligand Interaction Patterns.

Charles Abreu Santana, Fabio Ribeiro Cerqueira, Carlos Henrique da Silveira, Alexandre V. Fassio, Raquel Cardoso de Melo Minardi, Sabrina de Azevedo Silveira

Proceedings of the 16th IEEE International Conference on Bioinformatics and Bioengineering, 2016

2013

Enzymap: explorando metadados protéicos para modelagem e previsão de mudanças de anotação no Uniprot/Swiss-Prot.

Sabrina de Azevedo Silveira

PhD thesis, 2013

2012

ADVISe: Visualizing the dynamics of enzyme annotations in UniProt/Swiss-Prot.

Sabrina de Azevedo Silveira, Artur O. Rodrigues, Raquel Cardoso de Melo Minardi, Carlos Henrique da Silveira, Wagner Meira Jr.

Proceedings of the 2012 IEEE Symposium on Biological Data Visualization, 2012