Scott M. Dudek
According to our database1,
Scott M. Dudek
authored at least 40 papers
between 2005 and 2019.
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Bibliography
2019
Proceedings of the Genetic and Evolutionary Computation Conference Companion, 2019
2018
A simulation study investigating power estimates in phenome-wide association studies.
BMC Bioinform., 2018
BioData Min., 2018
2017
Using knowledge-driven genomic interactions for multi-omics data analysis: metadimensional models for predicting clinical outcomes in ovarian carcinoma.
J. Am. Medical Informatics Assoc., 2017
Discovery and replication of SNP-SNP interactions for quantitative lipid traits in over 60,000 individuals.
BioData Min., 2017
2016
Bioinform., 2016
Identification of genetic interaction networks via an evolutionary algorithm evolved Bayesian network.
BioData Min., 2016
Integrating Clinical Laboratory Measures and ICD-9 Code Diagnoses in Phenome-Wide Association Studies.
Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016
2015
Predicting censored survival data based on the interactions between meta-dimensional omics data in breast cancer.
J. Biomed. Informatics, 2015
Binning Somatic Mutations Based on Biological Knowledge for Predicting Survival: An Application in Renal Cell Carcinoma.
Proceedings of the Biocomputing 2015: Proceedings of the Pacific Symposium, 2015
2014
Bioinform., 2014
BioData Min., 2014
An integrated analysis of genome-wide DNA methylation and genetic variants underlying etoposide-induced cytotoxicity in European and African populations.
Proceedings of the Applications of Evolutionary Computation - 17th European Conference, 2014
2013
BioData Min., 2013
ATHENA: Identifying interactions between different levels of genomic data associated with cancer clinical outcomes using grammatical evolution neural network.
BioData Min., 2013
Next-Generation Analysis of Cataracts: Determining Knowledge Driven Gene-Gene Interactions Using Biofilter, and Gene-Environment Interactions Using the PhenX Toolkit.
Proceedings of the Biocomputing 2013: Proceedings of the Pacific Symposium, 2013
ATHENA: A Tool for Meta-Dimensional Analysis Applied to Genotypes and Gene Expression Data to Predict HDL Cholesterol Levels.
Proceedings of the Biocomputing 2013: Proceedings of the Pacific Symposium, 2013
Evaluation of Parameter Contribution to Neural Network Size and Fitness in ATHENA for Genetic Analysis.
Proceedings of the Genetic Programming Theory and Practice XI [GPTP 2013, 2013
2012
Visually integrating and exploring high throughput Phenome-Wide Association Study (PheWAS) results using PheWAS-View.
BioData Min., 2012
Comparison of Methods for Meta-dimensional Data Analysis Using in Silico and Biological Data Sets.
Proceedings of the Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, 2012
2011
Proceedings of the Biocomputing 2011: Proceedings of the Pacific Symposium, 2011
ATHENA Optimization: The Effect of Initial Parameter Settings across Different Genetic Models.
Proceedings of the Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, 2011
2010
Bioinform., 2010
ATHENA: A knowledge-based hybrid backpropagation-grammatical evolution neural network algorithm for discovering epistasis among quantitative trait Loci.
BioData Min., 2010
Synthesis-View: visualization and interpretation of SNP association results for multi-cohort, multi-phenotype data and meta-analysis.
BioData Min., 2010
Finding Unique Filter Sets in PLATO: A Precursor to Efficient Interaction Analysis in GWAS Data.
Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010
Incorporating Domain Knowledge into Evolutionary Computing for Discovering Gene-Gene Interaction.
Proceedings of the Parallel Problem Solving from Nature, 2010
Initialization parameter sweep in ATHENA: optimizing neural networks for detecting gene-gene interactions in the presence of small main effects.
Proceedings of the Genetic and Evolutionary Computation Conference, 2010
Grammatical Evolution of Neural Networks for Discovering Epistasis among Quantitative Trait Loci.
Proceedings of the Evolutionary Computation, 2010
2009
Biofilter: A Knowledge-Integration System for the Multi-Locus Analysis of Genome-Wide Association Studies.
Proceedings of the Biocomputing 2009: Proceedings of the Pacific Symposium, 2009
2008
Alternative contingency table measures improve the power and detection of multifactor dimensionality reduction.
BMC Bioinform., 2008
A balanced accuracy fitness function leads to robust analysis using grammatical evolution neural networks in the case of class imbalance.
Proceedings of the Genetic and Evolutionary Computation Conference, 2008
Proceedings of the Evolutionary Computation, 2008
2006
Parallel multifactor dimensionality reduction: a tool for the large-scale analysis of gene-gene interactions.
Bioinform., 2006
Data Simulation Software for Whole-Genome Association and Other Studies in Human Genetics.
Proceedings of the Biocomputing 2006, 2006
Alternative cross-over strategies and selection techniques for grammatical evolution optimized neural networks.
Proceedings of the Genetic and Evolutionary Computation Conference, 2006
Proceedings of the Applications of Evolutionary Computing, 2006
Understanding the Evolutionary Process of Grammatical Evolution Neural Networks for Feature Selection in Genetic Epidemiology.
Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2006
2005
Proceedings of the Biocomputing 2005, 2005
Can Neural Network Constraints in GP Provide Power to Detect Genes Associated with Human Disease?.
Proceedings of the Applications of Evolutionary Computing, 2005