Shuilin Jin
Orcid: 0000-0002-2318-432X
According to our database1,
Shuilin Jin authored at least 26 papers
between 2013 and 2026.
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Bibliography
2026
Accurate and efficient HiChIP interaction detection by modeling restriction enzyme cut site density as biological signal.
Briefings Bioinform., 2026
2025
Nat. Comput. Sci., August, 2025
A comparison of integration methods for single-cell RNA sequencing data and ATAC sequencing data.
Quant. Biol., 2025
Spatial domain identification method based on multi-view graph convolutional network and contrastive learning.
PLoS Comput. Biol., 2025
Integration of unpaired single cell omics data by deep transfer graph convolutional network.
PLoS Comput. Biol., 2025
HyperDiffuseNet: A Deep Hyperbolic Manifold Learning Method for Dimensionality Reduction in Spatial Transcriptomics.
J. Comput. Biol., 2025
scGT: integration algorithm for single-cell RNA-seq and ATAC-seq based on graph transformer.
Bioinform., 2025
reDA: differential abundance testing on scATAC-seq data using random walk with restart.
Bioinform., 2025
scBCN: deep learning-based batch correction network for integration of heterogeneous single-cell data.
Briefings Bioinform., 2025
2022
Correction: SDImpute: A statistical block imputation method based on cell-level and gene-level information for dropouts in single-cell RNA-seq data.
PLoS Comput. Biol., 2022
2021
SDImpute: A statistical block imputation method based on cell-level and gene-level information for dropouts in single-cell RNA-seq data.
PLoS Comput. Biol., 2021
2020
ERDS-Exome: A Hybrid Approach for Copy Number Variant Detection from Whole-Exome Sequencing Data.
IEEE ACM Trans. Comput. Biol. Bioinform., 2020
NDRindex: a method for the quality assessment of single-cell RNA-Seq preprocessing data.
BMC Bioinform., 2020
IEEE Access, 2020
2019
A Method Based on Differential Entropy-Like Function for Detecting Differentially Expressed Genes Across Multiple Conditions in RNA-Seq Studies.
Entropy, 2019
ProbPFP: a multiple sequence alignment algorithm combining hidden Markov model optimized by particle swarm optimization with partition function.
BMC Bioinform., 2019
BIN1 rs744373 variant shows different association with Alzheimer's disease in Caucasian and Asian populations.
BMC Bioinform., 2019
NDRindex: A method for the quality assessment of single-cell RNA-Seq preprocessing data.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
2018
Disease status affects the association between rs4813620 and the expression of Alzheimer's disease susceptibility gene <i>TRIB3</i>.
Proc. Natl. Acad. Sci. USA, 2018
BIN1 rs744373 Variant Is Significantly Associated with Alzheimer's Disease in Caucasian but Not East Asian Populations.
Proceedings of the Intelligent Computing Theories and Application, 2018
ProbPFP: A Multiple Sequence Alignment Algorithm Combining Partition Function and Hidden Markov Model with Particle Swarm Optimization.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
2017
DTWscore: differential expression and cell clustering analysis for time-series single-cell RNA-seq data.
BMC Bioinform., 2017
2016
ERDS-pe: A paired hidden Markov model for copy number variant detection from whole-exome sequencing data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016
2015
LncRNA2Target: a database for differentially expressed genes after lncRNA knockdown or overexpression.
Nucleic Acids Res., 2015
2013
Int. J. Data Min. Bioinform., 2013