Qinghua Jiang

Orcid: 0000-0002-1827-0389

According to our database1, Qinghua Jiang authored at least 44 papers between 2009 and 2023.

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Bibliography

2023
DeepCCI: a deep learning framework for identifying cell-cell interactions from single-cell RNA sequencing data.
Bioinform., October, 2023

An interpretable single-cell RNA sequencing data clustering method based on latent Dirichlet allocation.
Briefings Bioinform., July, 2023

Single-cell transcriptomics reveals the interaction between peripheral CD4<sup>+</sup> CTLs and mesencephalic endothelial cells mediated by IFNG in Parkinson's disease.
Comput. Biol. Medicine, May, 2023

Integrated smart analytics of nucleic acid amplification tests <i>via</i> paper microfluidics and deep learning in cloud computing.
Biomed. Signal Process. Control., May, 2023

An Integrated Calibration Scheme for Attitude Benchmark of Micro-nano Satellites and Its Experiments Based on In-Orbit Data.
Proceedings of the 8th International Conference on Automation, 2023

2022
An efficient multilayer RBF neural network and its application to regression problems.
Neural Comput. Appl., 2022

MutCov: A pipeline for evaluating the effect of mutations in spike protein on infectivity and antigenicity of SARS-CoV-2.
Comput. Biol. Medicine, 2022

Network analysis between neuron dysfunction and neuroimmune response based on neural single-cell transcriptome of COVID-19 patients.
Comput. Biol. Medicine, 2022

Overview of structural variation calling: Simulation, identification, and visualization.
Comput. Biol. Medicine, 2022

Impact of mutations in SARS-COV-2 spike on viral infectivity and antigenicity.
Briefings Bioinform., 2022

CBLRR: a cauchy-based bounded constraint low-rank representation method to cluster single-cell RNA-seq data.
Briefings Bioinform., 2022

Identification of alternative splicing-derived cancer neoantigens for mRNA vaccine development.
Briefings Bioinform., 2022

2021
Identification of sub-Golgi protein localization by use of deep representation learning features.
Bioinform., 2021

DLpTCR: an ensemble deep learning framework for predicting immunogenic peptide recognized by T cell receptor.
Briefings Bioinform., 2021

Global characterization of B cell receptor repertoire in COVID-19 patients by single-cell V(D)J sequencing.
Briefings Bioinform., 2021

Comprehensive analysis of partial methylation domains in colorectal cancer based on single-cell methylation profiles.
Briefings Bioinform., 2021

Precision Clock Synchronization Method for Towed Line Array Sonar.
Proceedings of the IEEE International Conference on Signal Processing, 2021

2020
ERDS-Exome: A Hybrid Approach for Copy Number Variant Detection from Whole-Exome Sequencing Data.
IEEE ACM Trans. Comput. Biol. Bioinform., 2020

Morbigenous brain region and gene detection with a genetically evolved random neural network cluster approach in late mild cognitive impairment.
Bioinform., 2020

2019
LncRNA2Target v2.0: a comprehensive database for target genes of lncRNAs in human and mouse.
Nucleic Acids Res., 2019

ProbPFP: a multiple sequence alignment algorithm combining hidden Markov model optimized by particle swarm optimization with partition function.
BMC Bioinform., 2019

BIN1 rs744373 variant shows different association with Alzheimer's disease in Caucasian and Asian populations.
BMC Bioinform., 2019

A learning-based framework for miRNA-disease association identification using neural networks.
Bioinform., 2019

2018
Disease status affects the association between rs4813620 and the expression of Alzheimer's disease susceptibility gene <i>TRIB3</i>.
Proc. Natl. Acad. Sci. USA, 2018

EWAS: epigenome-wide association study software 2.0.
Bioinform., 2018

DincRNA: a comprehensive web-based bioinformatics toolkit for exploring disease associations and ncRNA function.
Bioinform., 2018

CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases.
Database J. Biol. Databases Curation, 2018

BIN1 rs744373 Variant Is Significantly Associated with Alzheimer's Disease in Caucasian but Not East Asian Populations.
Proceedings of the Intelligent Computing Theories and Application, 2018

ProbPFP: A Multiple Sequence Alignment Algorithm Combining Partition Function and Hidden Markov Model with Particle Swarm Optimization.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017
DTWscore: differential expression and cell clustering analysis for time-series single-cell RNA-seq data.
BMC Bioinform., 2017

GED: a manually curated comprehensive resource for epigenetic modification of gametogenesis.
Briefings Bioinform., 2017

2016
Preface.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

ERDS-pe: A paired hidden Markov model for copy number variant detection from whole-exome sequencing data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

InfDisSim: A novel method for measuring disease similarity based on information flow.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

2015
LncRNA2Target: a database for differentially expressed genes after lncRNA knockdown or overexpression.
Nucleic Acids Res., 2015

misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads.
BMC Bioinform., 2015

2014
An integrative approach for measuring semantic similarities using gene ontology.
BMC Syst. Biol., 2014

Continuous but non-smooth adaptive observer of a class of nonlinear systems.
Proceedings of the 2nd International Conference on Systems and Informatics, 2014

2013
Predicting human microRNA-disease associations based on support vector machine.
Int. J. Data Min. Bioinform., 2013

2010
Design, Fabrication, and Testing of a Bulk Micromachined Inertial Measurement Unit.
Sensors, 2010

Prioritization of disease microRNAs through a human phenome-microRNAome network.
BMC Syst. Biol., 2010

Weighted Network-Based Inference of Human MicroRNA-Disease Associations.
Proceedings of the Fifth International Conference on Frontier of Computer Science and Technology, 2010

Predicting human microRNA-disease associations based on support vector machine.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

2009
miR2Disease: a manually curated database for microRNA deregulation in human disease.
Nucleic Acids Res., 2009


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