Yadong Wang

According to our database1, Yadong Wang authored at least 127 papers between 1997 and 2019.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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On csauthors.net:

Bibliography

2019
Intercontinental Liner Shipping Service Design.
Transportation Science, 2019

Accurate Pelvis and Femur Segmentation in Hip CT With a Novel Patch-Based Refinement.
IEEE J. Biomedical and Health Informatics, 2019

Two-machine flowshop scheduling in a physical examination center.
J. Comb. Optim., 2019

Simulating genetically heterozygous genomes in the tumour tissue according to its clonal evolution history.
I. J. Computational Biology and Drug Design, 2019

Integrated entropy-based approach for analyzing exons and introns in DNA sequences.
BMC Bioinformatics, 2019

TideHunter: efficient and sensitive tandem repeat detection from noisy long-reads using seed-and-chain.
Bioinformatics, 2019

Spare Parts Closed-Loop Logistics Network Optimization Problems: Model Formulation and Meta-Heuristics Solution.
IEEE Access, 2019

Prediction of Human LncRNAs Based on Integrated Information Entropy Features.
Proceedings of the Intelligent Computing Theories and Application, 2019

2018
Joint Ship Schedule Design and Sailing Speed Optimization for a Single Inland Shipping Service with Uncertain Dam Transit Time.
Transportation Science, 2018

Optimizing the Link Directions of Personal Rapid Transit Network.
IEEE Trans. Intelligent Transportation Systems, 2018

MeDReaders: a database for transcription factors that bind to methylated DNA.
Nucleic Acids Research, 2018

3D surface voxel tracing corrector for accurate bone segmentation.
Int. J. Comput. Assist. Radiol. Surg., 2018

A framework for analyzing DNA methylation data from Illumina Infinium HumanMethylation450 BeadChip.
BMC Bioinformatics, 2018

Modeling and correct the GC bias of tumor and normal WGS data for SCNA based tumor subclonal population inferring.
BMC Bioinformatics, 2018

Prediction for High Risk Clinical Symptoms of Epilepsy Based on Deep Learning Algorithm.
IEEE Access, 2018

DeepGauge: multi-granularity testing criteria for deep learning systems.
Proceedings of the 33rd ACM/IEEE International Conference on Automated Software Engineering, 2018

DeepMutation: Mutation Testing of Deep Learning Systems.
Proceedings of the 29th IEEE International Symposium on Software Reliability Engineering, 2018

Multi-objective Heuristic Multicast Routing Algorithm in NDN.
Proceedings of the IoT as a Service - 4th EAI International Conference, 2018

ProbPFP: A Multiple Sequence Alignment Algorithm Combining Partition Function and Hidden Markov Model with Particle Swarm Optimization.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Exploring DNA Methylation Data of Lung Cancer Samples with Variational Autoencoders.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Analysis for Early Seizure Detection System Based on Deep Learning Algorithm.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Identifying Representative Network Motifs for Inferring Higher-order Structure of Biological Networks.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Predicting candidate disease-related lncRNAs based on network random walk.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Identifying Candidate Diseases-related Metabolites Based on Disease Similarity.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

DeepDNA: a hybrid convolutional and recurrent neural network for compressing human mitochondrial genomes.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Fast variation-aware read alignment with deBGA-VARA.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

deSPI: efficient classification of metagenomics reads with lightweight de Bruijn graph-based reference indexing.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

rCANID: read Clustering and Assembly-based Novel Insertion Detection tool.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

p-SCNAClonal: Somatic copy number alterations based tumor subclonal population inferring method.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A Network-on-Chip Accelerator for Genome Variant Analysis.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017
Low-rank and sparse decomposition based shape model and probabilistic atlas for automatic pathological organ segmentation.
Medical Image Analysis, 2017

WDNfinder: A method for minimum driver node set detection and analysis in directed and weighted biological network.
J. Bioinformatics and Computational Biology, 2017

A novel method to measure the semantic similarity of HPO terms.
IJDMB, 2017

DTWscore: differential expression and cell clustering analysis for time-series single-cell RNA-seq data.
BMC Bioinformatics, 2017

Identifying term relations cross different gene ontology categories.
BMC Bioinformatics, 2017

rMFilter: acceleration of long read-based structure variation calling by chimeric read filtering.
Bioinformatics, 2017

LAMSA: fast split read alignment with long approximate matches.
Bioinformatics, 2017

ABDTR: Approximation-Based Dynamic Traffic Regulation for Networks-on-Chip Systems.
Proceedings of the 2017 IEEE International Conference on Computer Design, 2017

Collaborative Computation Offloading in Heterogeneous Asynchronous Cloud Environment.
Proceedings of the 41st IEEE Annual Computer Software and Applications Conference, 2017

FNSemSim: An improved disease similarity method based on network fusion.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

A framework for analyzing DNA methylation data from Illumina Infinium HumanMethylation450 BeadChip.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

A bucket index correction based method for compression of genomic sequencing data.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Pysubsim-tree: A package for simulating tumor genomes according to tumor evolution history.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Pre-SCNAClonal: Efficient GC bias correction for SCNA based tumor subclonal populations inferring.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2016
A hierarchical local region-based sparse shape composition for liver segmentation in CT scans.
Pattern Recognition, 2016

Shape-intensity prior level set combining probabilistic atlas and probability map constrains for automatic liver segmentation from abdominal CT images.
Int. J. Comput. Assist. Radiol. Surg., 2016

Comparison among dimensionality reduction techniques based on Random Projection for cancer classification.
Computational Biology and Chemistry, 2016

A network-based pathway-expanding approach for pathway analysis.
BMC Bioinformatics, 2016

Extending gene ontology with gene association networks.
Bioinformatics, 2016

deBWT: parallel construction of Burrows-Wheeler Transform for large collection of genomes with de Bruijn-branch encoding.
Bioinformatics, 2016

Joint detection of copy number variations in parent-offspring trios.
Bioinformatics, 2016

rHAT: fast alignment of noisy long reads with regional hashing.
Bioinformatics, 2016

deBGA: read alignment with de Bruijn graph-based seed and extension.
Bioinformatics, 2016

Characterizing the roles of long non-coding RNA in rat alcohol preference.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

Accurate annotation of metagenomic data without species-level references.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

DMcompress: Dynamic Markov models for bacterial genome compression.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

Preface.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

ERDS-pe: A paired hidden Markov model for copy number variant detection from whole-exome sequencing data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

Measuring phenotype semantic similarity using Human Phenotype Ontology.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

DisSetSim: An online system for calculating similarity between disease sets.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

2015
Accurate Vessel Segmentation With Constrained B-Snake.
IEEE Trans. Image Processing, 2015

Using Semantic Association to Extend and Infer Literature-Oriented Relativity Between Terms.
IEEE/ACM Trans. Comput. Biology Bioinform., 2015

Toward a Smartphone Application for Estimation of Pulse Transit Time.
Sensors, 2015

LncRNA2Target: a database for differentially expressed genes after lncRNA knockdown or overexpression.
Nucleic Acids Research, 2015

Surface-based rigid registration using a global optimization algorithm for assessment of MRI knee cartilage thickness changes.
Biomed. Signal Proc. and Control, 2015

IRcall and IRclassifier: two methods for flexible detection of intron retention events from RNA-Seq data.
BMC Genomics, 2015

misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads.
BMC Bioinformatics, 2015

Improving multiple sequence alignment by using better guide trees.
BMC Bioinformatics, 2015

Measuring semantic similarities by combining gene ontology annotations and gene co-function networks.
BMC Bioinformatics, 2015

Family genome browser: visualizing genomes with pedigree information.
Bioinformatics, 2015

A web tool for measuring gene semantic similarities by combining gene ontology and gene co-function networks.
Proceedings of the 6th ACM Conference on Bioinformatics, 2015

2014
The personal genome browser: visualizing functions of genetic variants.
Nucleic Acids Research, 2014

Automatic centerline detection of small three-dimensional vessel structures.
J. Electronic Imaging, 2014

An integrative approach for measuring semantic similarities using gene ontology.
BMC Systems Biology, 2014

Transcriptional regulation prediction of antiestrogen resistance in breast cancer based on RNA polymerase II binding data.
BMC Bioinformatics, 2014

Towards integrative gene functional similarity measurement.
BMC Bioinformatics, 2014

A gradient-boosting approach for filtering de novo mutations in parent-offspring trios.
Bioinformatics, 2014

ESclassifier: A random forest classifier for detection of exon skipping events from RNA-Seq data.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

2013
Accuracy Limits for the Thickness Measurement of the Hip Joint Cartilage in 3-D MR Images: Simulation and Validation.
IEEE Trans. Biomed. Engineering, 2013

A Radiosonde Using a Humidity Sensor Array with a Platinum Resistance Heater and Multi-Sensor Data Fusion.
Sensors, 2013

Automatic segmentation technique for acetabulum and femoral head in CT images.
Pattern Recognition, 2013

Predicting human microRNA-disease associations based on support vector machine.
IJDMB, 2013

Identifying cross-category relations in gene ontology and constructing genome-specific term association networks.
BMC Bioinformatics, 2013

Combination of ROSVM and LR for Spam Filter.
Proceedings of the 2013 International Conference on Asian Language Processing, 2013

FPGA-based remote pulse rate detection using photoplethysmographic imaging.
Proceedings of the 2013 IEEE International Conference on Body Sensor Networks, 2013

PERGA: A Paired-End Read Guided De Novo Assembler for Extending Contigs Using SVM Approach.
Proceedings of the ACM Conference on Bioinformatics, 2013

GLProbs: Aligning multiple sequences adaptively.
Proceedings of the ACM Conference on Bioinformatics, 2013

2012
A differentor-based adaptive ontology-matching approach.
J. Inf. Sci., 2012

A Privacy-Preserving Classification Method Based on Singular Value Decomposition.
Int. Arab J. Inf. Technol., 2012

Improvements on a privacy-protection algorithm for DNA sequences with generalization lattices.
Computer Methods and Programs in Biomedicine, 2012

regSNPs: a strategy for prioritizing regulatory single nucleotide substitutions.
Bioinformatics, 2012

PRISM: Pair-read informed split-read mapping for base-pair level detection of insertion, deletion and structural variants.
Bioinformatics, 2012

A review of non-contact, low-cost physiological information measurement based on photoplethysmographic imaging.
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012

Modelling non-stationary gene regulatory process with hidden Markov Dynamic Bayesian Network.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

2011
A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer.
BMC Systems Biology, 2011

Empirical bayes model comparisons for differential methylation analysis.
Proceedings of the 2011 IEEE International Workshop on Genomic Signal Processing and Statistics, 2011

2010
A Privacy-Preserving Data Mining Method Based on Singular Value Decomposition and Independent Component Analysis.
Data Science Journal, 2010

A proof of the convergence theorem of maximum-entropy clustering algorithm.
SCIENCE CHINA Information Sciences, 2010

Prioritization of disease microRNAs through a human phenome-microRNAome network.
BMC Systems Biology, 2010

Alignment results of SOBOM for OAEI 2010.
Proceedings of the 5th International Workshop on Ontology Matching (OM-2010), 2010

An improved ACO metaheuristic for solving the MCP.
Proceedings of the Sixth International Conference on Natural Computation, 2010

Weighted Network-Based Inference of Human MicroRNA-Disease Associations.
Proceedings of the Fifth International Conference on Frontier of Computer Science and Technology, 2010

Predicting human microRNA-disease associations based on support vector machine.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

2009
A Support-Vector-Machine-Based Approach to RF Sensor Spectral Signature Classifications.
IEEE Trans. Instrumentation and Measurement, 2009

Hybrid digital-analog coding with bandwidth compression for gaussian source-channel pairs.
IEEE Trans. Communications, 2009

miR2Disease: a manually curated database for microRNA deregulation in human disease.
Nucleic Acids Research, 2009

Alignment Results of SOBOM for OAEI 2009.
Proceedings of the 4th International Workshop on Ontology Matching (OM-2009) collocated with the 8th International Semantic Web Conference (ISWC-2009) Chantilly, 2009

Prediction of Human Disease Genes Based on Associations between Phenome and Proteins.
Proceedings of the 2nd International Conference on BioMedical Engineering and Informatics, 2009

Global Similarity and Local Variance in Human Gene Coexpression Networks.
Proceedings of the Artificial Intelligence and Computational Intelligence, 2009

2008
Constructing automated installation application system of community health service based on FoxPro8.0.
Kybernetes, 2008

Constructing disease-specific gene networks using pair-wise relevance metric: Application to colon cancer identifies interleukin 8, desmin and enolase 1 as the central elements.
BMC Systems Biology, 2008

On the public information embedding capacity region under multiple access attacks.
Proceedings of the 2008 IEEE International Symposium on Information Theory, 2008

On the Stationary Solution of PDE based Curve Evolution.
Proceedings of the British Machine Vision Conference 2008, Leeds, UK, September 2008, 2008

2007
Tornadic Time-Series Detection Using Eigen Analysis and a Machine Intelligence-Based Approach.
IEEE Geosci. Remote Sensing Lett., 2007

Distributed Learning Strategy Based on Chips for Classification with Large-Scale Dataset.
IJPRAI, 2007

A Sufficient Condition for Private Information Hiding of Two Correlated Sources Under Multiple Access Attacks.
Proceedings of the IEEE International Symposium on Information Theory, 2007

2006
Neural Networks' Distributed Cooperative Learning Strategy Based on Agent and Chips.
Journal of Computer Research and Development, 2006

2005
Comprehensive modulation representation for automatic speech recognition.
Proceedings of the INTERSPEECH 2005, 2005

Research and Design of Distributed Neural Networks with Chip Training Algorithm.
Proceedings of the Advances in Natural Computation, First International Conference, 2005

A Novel Feature Ensemble Technology to Improve Prediction Performance of Multiple Heterogeneous Phenotypes Based on Microarray Data.
Proceedings of the Fuzzy Systems and Knowledge Discovery, Second International Conference, 2005

Design of VQ-Based Hybrid Digital-Analog Joint Source-Channel Codes for Image Communication.
Proceedings of the 2005 Data Compression Conference (DCC 2005), 2005

2004
Improving fuzzy c-means clustering based on feature-weight learning.
Pattern Recognition Letters, 2004

2003
Average instantaneous frequency (AIF) and average log-envelopes (ALE) for ASR with the Aurora 2 database.
Proceedings of the 8th European Conference on Speech Communication and Technology, EUROSPEECH 2003, 2003

2001
On the duality between line-spectral frequencies and zero-crossings of signals.
IEEE Trans. Speech and Audio Processing, 2001

A new approach to fuzzy rule generation: fuzzy extension matrix.
Fuzzy Sets and Systems, 2001

2000
A new real-zero conversion algorithm.
Proceedings of the IEEE International Conference on Acoustics, 2000

1997
The minimum feature subset selection problem.
J. Comput. Sci. Technol., 1997


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