Tetsuro Toyoda

According to our database1, Tetsuro Toyoda authored at least 31 papers between 2003 and 2014.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

On csauthors.net:

Bibliography

2014
A promoter-level mammalian expression atlas.
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Nature, 2014

2013
PosMed: ranking genes and bioresources based on Semantic Web Association Study.
Nucleic Acids Research, 2013

PromoterCAD: data-driven design of plant regulatory DNA.
Nucleic Acids Research, 2013

PosMed: A Biomedical Entity Prioritisation Tool Based on Statistical Inference over Literature and the Semantic Web.
Proceedings of the 6th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2013

Organizing Scientific Competitions on the Semantic Web.
Proceedings of the Database and Expert Systems Applications, 2013

2012
Positional correlation analysis improves reconstruction of full-length transcripts and alternative isoforms from noisy array signals or short reads.
Bioinformatics, 2012

Development of Linked Open Data for Bioresources.
Proceedings of the Semantic Technology, Second Joint International Conference, 2012

2011
The RIKEN integrated database of mammals.
Nucleic Acids Research, 2011

Semantic-JSON: a lightweight web service interface for Semantic Web contents integrating multiple life science databases.
Nucleic Acids Research, 2011

BioLOD.org: ontology-based integration of biological linked open data.
Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences, 2011

BioSPARQL: ontology-based smart building of SPARQL queries for biological linked open data.
Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences, 2011

LinkData.org supports Japan's LOD challenge.
Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences, 2011

Genome design with the semantic web.
Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences, 2011

An Advanced Strategy for Integration of Biological Measurement Data.
Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

2010
sORF finder: a program package to identify small open reading frames with high coding potential.
Bioinformatics, 2010

2009
PosMed (Positional Medline): prioritizing genes with an artificial neural network comprising medical documents to accelerate positional cloning.
Nucleic Acids Research, 2009

OmicBrowse: a Flash-based high-performance graphics interface for genomic resources.
Nucleic Acids Research, 2009

2008
Objective Evaluation Measures of Genetic Marker Selection in Large-Scale SNP genotyping.
J. Bioinformatics and Computational Biology, 2008

Statistical search on the Semantic Web.
Bioinformatics, 2008

Penta and Hexa Statements are Suitable for Representing Omics Knowledge on the Semantic Web.
Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences ( SWAT4LS ) Edinburgh, 2008

A Secure Data Repository Integrating Huge Volumes of Digital Contents as a Semantic Web.
Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences ( SWAT4LS ) Edinburgh, 2008

2007
Phenosite: a Web Database Integrating the mouse phenotyping Platform and the Experimental Procedures in mice.
J. Bioinformatics and Computational Biology, 2007

OmicBrowse: a browser of multidimensional omics annotations.
Bioinformatics, 2007

2006
Erratum: "In Silico Phenotypic Screening Method of Mutants Based on Statistical Modeling of Genetically Mixed Samples".
J. Bioinformatics and Computational Biology, 2006

2005
RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome.
Nucleic Acids Research, 2005

in Silico Phenotypic Screening Method of Mutants Based on Statistical Modeling of Genetically Mixed Samples.
J. Bioinformatics and Computational Biology, 2005

Three-dimensional Definition of Leaf Morphological Traits of arabidopsis in Silico Phenotypic Analysis.
J. Bioinformatics and Computational Biology, 2005

2004
Omic space: coordinate-based integration and analysis of genomic phenomic interactions.
Bioinformatics, 2004

TraitMap: an XML-based genetic-map database combining multigenic loci and biomolecular networks.
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004

2003
GSCope: a clipped fisheye viewer effective for highly complicated biomolecular network graphs.
Bioinformatics, 2003

KnowledgeEditor: a new tool for interactive modeling and analyzing biological pathways based on microarray data.
Bioinformatics, 2003


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