Theodore Alexandrov

According to our database, Theodore Alexandrov authored at least 23 papers between 2008 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

OffsampleAI: artificial intelligence approach to recognize off-sample mass spectrometry images.

Katja Ovchinnikova, Vitaly Kovalev, Lachlan Stuart, Theodore Alexandrov

BMC Bioinform., 2020

ColocML: machine learning quantifies co-localization between mass spectrometry images.

Katja Ovchinnikova, Lachlan Stuart, Alexander Rakhlin, Sergey I. Nikolenko, Theodore Alexandrov

Bioinform., 2020

2018

Two-Exponential Models of Gene Expression Patterns for Noisy Experimental Data.

Theodore Alexandrov, Nina Golyandina, David M. Holloway, Alexander Shlemov, Alexander V. Spirov

J. Comput. Biol., 2018

Curatr: a web application for creating, curating and sharing a mass spectral library.

Andrew Palmer, Prasad Phapale, Dominik Fay, Theodore Alexandrov

Bioinform., 2018

2017

Computational Metabolomics: Identification, Interpretation, Imaging (Dagstuhl Seminar 17491).

Theodore Alexandrov, Sebastian Böcker, Pieter C. Dorrestein, Emma Schymanski

Dagstuhl Reports, 2017

2015

Using collective expert judgements to evaluate quality measures of mass spectrometry images.

Andrew Palmer, Ekaterina Ovchinnikova, Mikael Thuné, Régis Lavigne, Blandine Guével, Andrey Dyatlov, Olga Vitek, Charles Pineau, Mats Borén, Theodore Alexandrov

Bioinform., 2015

2013

Efficient Spatial Segmentation of Hyper-spectral 3D Volume Data.

Jan Hendrik Kobarg, Theodore Alexandrov

Proceedings of the Algorithms from and for Nature and Life, 2013

The Young PI Buzz: Learning from the Organizers of the Junior Principal Investigator Meeting at ISMB-ECCB 2013.

Jeroen de Ridder, Yana Bromberg, Magali Michaut, Venkata P. Satagopam, Manuel Corpas, Geoff MacIntyre, Theodore Alexandrov

PLoS Comput. Biol., 2013

Learning How to Run a Lab: Interviews with Principal Investigators.

Theodore Alexandrov, Philip E. Bourne

PLoS Comput. Biol., 2013

Testing for presence of known and unknown molecules in imaging mass spectrometry.

Theodore Alexandrov, Andreas M. Bartels

Bioinform., 2013

2012

Magnification of Label Maps With a Topology-Preserving Level-Set Method.

Dennis Trede, Theodore Alexandrov, Chen Sagiv, Peter Maass

IEEE Trans. Image Process., 2012

On the Importance of Mathematical Methods for Analysis of MALDI-Imaging Mass Spectrometry Data.

Dennis Trede, Jan Hendrik Kobarg, Janina Oetjen, Herbert Thiele, Peter Maass, Theodore Alexandrov

J. Integr. Bioinform., 2012

MALDI imaging mass spectrometry: statistical data analysis and current computational challenges.

Theodore Alexandrov

BMC Bioinform., 2012

3D Visualisierung von Organismen.

Herbert Thiele, Dennis Trede, Stefan Heldmann, Theodore Alexandrov, Bernd Fischer, Peter Maass

Proceedings of the 57. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie, 42. Jahrestagung der Gesellschaft für Informatik, Was bewegt uns in der/die Zukunft?, 2012

A Two-Step Soft Segmentation Procedure for MALDI Imaging Mass Spectrometry Data.

Ilya Chernyavsky, Theodore Alexandrov, Peter Maass, Sergey I. Nikolenko

Proceedings of the German Conference on Bioinformatics 2012, 2012

Measuring Gene Expression Noise in Early Drosophila Embryos: The Highly Dynamic Compartmentalized Micro-environment of the Blastoderm Is One of the Main Sources of Noise.

Alexander V. Spirov, Nina Golyandina, David M. Holloway, Theodore Alexandrov, Ekaterina N. Spirova, Francisco J. P. Lopes

Proceedings of the Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, 2012

2011

Efficient spatial segmentation of large imaging mass spectrometry datasets with spatially aware clustering.

Theodore Alexandrov, Jan Hendrik Kobarg

Bioinform., 2011

Abductive Reasoning with a Large Knowledge Base for Discourse Processing.

Ekaterina Ovchinnikova, Niloofar Montazeri, Theodore Alexandrov, Jerry R. Hobbs, Michael C. McCord, Rutu Mulkar-Mehta

Proceedings of the Ninth International Conference on Computational Semantics, 2011

2010

Data-Driven and Ontological Analysis of FrameNet for Natural Language Reasoning.

Ekaterina Ovchinnikova, Laure Vieu, Alessandro Oltramari, Stefano Borgo, Theodore Alexandrov

Proceedings of the International Conference on Language Resources and Evaluation, 2010

2009

Biomarker discovery in MALDI-TOF serum protein profiles using discrete wavelet transformation.

Theodore Alexandrov, Jens Decker, Bart J. A. Mertens, André M. Deelder, Rob A. E. M. Tollenaar, Peter Maass, Herbert Thiele

Bioinform., 2009

Self-taught Learning for Classification of Mass Spectrometry Data: A Case Study of Colorectal Cancer.

Theodore Alexandrov

Proceedings of the German Conference on Bioinformatics 2009, 2009

Automatic Acquisition of the.

Ekaterina Ovchinnikova, Theodore Alexandrov, Tonio Wandmacher

Proceedings of the 2009 Conference on Empirical Methods in Natural Language Processing, 2009

2008

Singular Spectrum Analysis of Gene Expression Profiles of Early <i>Drosophila embryo</i>: Exponential-in-Distance Patterns.

Theodore Alexandrov, Nina Golyandina, Alexander V. Spirov

J. Electr. Comput. Eng., 2008