Yana Bromberg

According to our database, Yana Bromberg authored at least 24 papers between 2008 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

<i>mebipred</i>: identifying metal-binding potential in protein sequence.

Ariel A. Aptekmann, J. Buongiorno, D. Giovannelli, M. Glamoclija, Diego U. Ferreiro, Yana Bromberg

Bioinform., 2022

2021

PredictProtein - Predicting Protein Structure and Function for 29 Years.

Michael Bernhofer, Christian Dallago, Timothy Karl, Venkata P. Satagopam, Michael Heinzinger, Maria Littmann, Tobias Olenyi, Jiajun Qiu, Konstantin Schütze, Guy Yachdav, Haim Ashkenazy, Nir Ben-Tal, Yana Bromberg, Tatyana Goldberg, László Kaján, Seán I. O'Donoghue, Chris Sander, Andrea Schafferhans, Avner Schlessinger, Gerrit Vriend, Milot Mirdita, Piotr Gawron, Wei Gu, Yohan Jarosz, Christophe Trefois, Martin Steinegger, Reinhard Schneider, Burkhard Rost

Nucleic Acids Res., 2021

2020

Amino acid encoding for deep learning applications.

Hesham ElAbd, Yana Bromberg, Adrienne Hoarfrost, Tobias Lenz, Andre Franke, Mareike Wendorff

BMC Bioinform., 2020

2019

ISMB/ECCB 2019 Proceedings.

Yana Bromberg, Nadia El-Mabrouk, Predrag Radivojac

Bioinform., 2019

2018

Ten simple rules for drawing scientific comics.

Jason E. McDermott, Matthew Partridge, Yana Bromberg

PLoS Comput. Biol., 2018

fusionDB: assessing microbial diversity and environmental preferences via functional similarity networks.

Chengsheng Zhu, Yannick Mahlich, Maximilian Miller, Yana Bromberg

Nucleic Acids Res., 2018

HFSP: high speed homology-driven function annotation of proteins.

Yannick Mahlich, Martin Steinegger, Burkhard Rost, Yana Bromberg

Bioinform., 2018

ISMB 2018 proceedings.

Yana Bromberg, Predrag Radivojac

Bioinform., 2018

2017

clubber: removing the bioinformatics bottleneck in big data analyses.

Maximilian Miller, Chengsheng Zhu, Yana Bromberg

J. Integr. Bioinform., 2017

ISMB/ECCB 2017 proceedings.

Niko Beerenwinkel, Yana Bromberg

Bioinform., 2017

Session Introduction.

Yana Bromberg, Matthew W. Hahn, Predrag Radivojac

Proceedings of the Biocomputing 2017: Proceedings of the Pacific Symposium, 2017

2016

Predicted Molecular Effects of Sequence Variants Link to System Level of Disease.

Jonas Reeb, Maximilian Hecht, Yannick Mahlich, Yana Bromberg, Burkhard Rost

PLoS Comput. Biol., 2016

Computational Approaches to Study Microbes and Microbiomes.

Casey S. Greene, James A. Foster, Bruce A. Stanton, Deborah A. Hogan, Yana Bromberg

Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016

2015

Functional Basis of Microorganism Classification.

Chengsheng Zhu, Tom O. Delmont, Timothy M. Vogel, Yana Bromberg

PLoS Comput. Biol., 2015

Editor's Choice: SNP-SIG 2013: the state of the art of genomic variant interpretation.

Yana Bromberg, Emidio Capriotti

Bioinform., 2015

2014

PredictProtein - an open resource for online prediction of protein structural and functional features.

Guy Yachdav, Edda Kloppmann, László Kaján, Maximilian Hecht, Tatyana Goldberg, Tobias Hamp, Peter Hönigschmid, Andrea Schafferhans, Manfred Roos, Michael Bernhofer, Lothar Richter, Haim Ashkenazy, Marco Punta, Avner Schlessinger, Yana Bromberg, Reinhard Schneider, Gerrit Vriend, Chris Sander, Nir Ben-Tal, Burkhard Rost

Nucleic Acids Res., 2014

2013

The Young PI Buzz: Learning from the Organizers of the Junior Principal Investigator Meeting at ISMB-ECCB 2013.

Jeroen de Ridder, Yana Bromberg, Magali Michaut, Venkata P. Satagopam, Manuel Corpas, Geoff MacIntyre, Theodore Alexandrov

PLoS Comput. Biol., 2013

Chapter 15: Disease Gene Prioritization.

Yana Bromberg

PLoS Comput. Biol., 2013

2012

SNPdbe: constructing an nsSNP functional impacts database.

Christian Schaefer, Alice Meier, Burkhard Rost, Yana Bromberg

Bioinform., 2012

Bioinformatics for personal genome interpretation.

Emidio Capriotti, Nathan L. Nehrt, Maricel G. Kann, Yana Bromberg

Briefings Bioinform., 2012

2010

MuD: an interactive web server for the prediction of non-neutral substitutions using protein structural data.

Gilad Wainreb, Haim Ashkenazy, Yana Bromberg, Alina Starovolsky-Shitrit, Turkan Haliloglu, Eytan Ruppin, Karen B. Avraham, Burkhard Rost, Nir Ben-Tal

Nucleic Acids Res., 2010

2009

Correlating protein function and stability through the analysis of single amino acid substitutions.

Yana Bromberg, Burkhard Rost

BMC Bioinform., 2009

2008

SNAP predicts effect of mutations on protein function.

Yana Bromberg, Guy Yachdav, Burkhard Rost

Bioinform., 2008

Comprehensive <i>in silico</i> mutagenesis highlights functionally important residues in proteins.

Yana Bromberg, Burkhard Rost

Proceedings of the ECCB'08 Proceedings, 2008