Olga Vitek
Orcid: 0000-0003-1728-1104Affiliations:
- Northeastern University, Boston, MA, USA
According to our database1,
Olga Vitek
authored at least 34 papers
between 2005 and 2023.
Collaborative distances:
Collaborative distances:
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Online presence:
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on orcid.org
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on ccs.neu.edu
On csauthors.net:
Bibliography
2023
A noise-robust deep clustering of biomolecular ions improves interpretability of mass spectrometric images.
Bioinform., February, 2023
Optimal adjustment sets for causal query estimation in partially observed biomolecular networks.
Bioinform., 2023
2022
Comput. Graph. Forum, 2022
2021
Leveraging Structured Biological Knowledge for Counterfactual Inference: A Case Study of Viral Pathogenesis.
IEEE Trans. Big Data, 2021
2020
Deep multiple instance learning classifies subtissue locations in mass spectrometry images from tissue-level annotations.
Bioinform., 2020
2019
ACM Trans. Program. Lang. Syst., 2019
FSE/CACM Rebuttal<sup>2</sup>: Correcting A Large-Scale Study of Programming Languages and Code Quality in GitHub.
CoRR, 2019
Unsupervised segmentation of mass spectrometric ion images characterizes morphology of tissues.
Bioinform., 2019
Integrating Markov processes with structural causal modeling enables counterfactual inference in complex systems.
Proceedings of the Advances in Neural Information Processing Systems 32: Annual Conference on Neural Information Processing Systems 2019, 2019
Proceedings of the 2019 CHI Conference on Human Factors in Computing Systems, 2019
2018
J. Comput. Biol., 2018
Proceedings of the Research in Computational Molecular Biology, 2018
2017
Bioinform., 2017
2015
Statistical elimination of spectral features with large between-run variation enhances quantitative protein-level conclusions in experiments with data-independent spectral acquisition.
BMC Bioinform., 2015
Using collective expert judgements to evaluate quality measures of mass spectrometry images.
Bioinform., 2015
<i>Cardinal</i>: an R package for statistical analysis of mass spectrometry-based imaging experiments.
Bioinform., 2015
2014
MSstats: an R package for statistical analysis of quantitative mass spectrometry-based proteomic experiments.
Bioinform., 2014
2013
PLoS Comput. Biol., 2013
Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size.
Bioinform., 2013
2012
A statistical model-building perspective to identification of MS/MS spectra with PeptideProphet.
BMC Bioinform., 2012
Statistical protein quantification and significance analysis in label-free LC-MS experiments with complex designs.
BMC Bioinform., 2012
Spatial segmentation and feature selection for desi imaging mass spectrometry data with spatially-aware sparse clustering.
BMC Bioinform., 2012
2011
Identification and quantification of metabolites in <sup>1</sup>H NMR spectra by Bayesian model selection.
Bioinform., 2011
Noise reduction in genome-wide perturbation screens using linear mixed-effect models.
Bioinform., 2011
2009
PLoS Comput. Biol., 2009
2008
Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.
BMC Bioinform., 2008
2005
Proceedings of the ECCB/JBI'05 Proceedings, Fourth European Conference on Computational Biology/Sixth Meeting of the Spanish Bioinformatics Network (Jornadas de BioInformática), Palacio de Congresos, Madrid, Spain, September 28, 2005