Thomas Sauter

According to our database, Thomas Sauter authored at least 19 papers between 2003 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

Project-based learning course on metabolic network modelling in computational systems biology.

Thomas Sauter, Tamara Bintener, Ali Kishk, Luana Presta, Tessy Prohaska, Daniel Guignard, Ni Zeng, Claudia Cipriani, Sundas Arshad, Thomas Pfau, Patricia Martins Conde, Maria Pires Pacheco

PLoS Comput. Biol., 2022

2021

Topological network measures for drug repositioning.

Apurva Badkas, Sébastien De Landtsheer, Thomas Sauter

Briefings Bioinform., 2021

2019

Towards the Integration of Metabolic Network Modelling and Machine Learning for the Routine Analysis of High-Throughput Patient Data.

Maria Pires Pacheco, Tamara Bintener, Thomas Sauter

Proceedings of the Automated Reasoning for Systems Biology and Medicine, 2019

An Efficient Machine Learning Method to Solve Imbalanced Data in Metabolic Disease Prediction.

Vânia Cecchini, Thanh-Phuong Nguyen, Thomas Pfau, Sébastien De Landtsheer, Thomas Sauter

Proceedings of the 11th International Conference on Knowledge and Systems Engineering, 2019

2017

FALCON: a toolbox for the fast contextualization of logical networks.

Sébastien De Landtsheer, Panuwat Trairatphisan, Philippe Lucarelli, Thomas Sauter

Bioinform., 2017

2016

Towards improved genome-scale metabolic network reconstructions: unification, transcript specificity and beyond.

Thomas Pfau, Maria Pires Pacheco, Thomas Sauter

Briefings Bioinform., 2016

2014

Fast Reconstruction of Compact Context-Specific Metabolic Network Models.

Nikos Vlassis, Maria Pires Pacheco, Thomas Sauter

PLoS Comput. Biol., 2014

Identification of New IκBα Complexes by an Iterative Experimental and Mathematical Modeling Approach.

Fabian Konrath, Johannes Witt, Thomas Sauter, Dagmar Kulms

PLoS Comput. Biol., 2014

2012

Probabilistic Model Checking of the PDGF Signaling Pathway.

Qixia Yuan, Panuwat Trairatphisan, Jun Pang, Sjouke Mauw, Monique Wiesinger, Thomas Sauter

Trans. Comp. Sys. Biology, 2012

2011

Modeling time delay in the NFκB signaling pathway following low dose IL-1 stimulation.

Johannes Witt, Sandra Barisic, Oliver Sawodny, Michael Ederer, Dagmar Kulms, Thomas Sauter

EURASIP J. Bioinform. Syst. Biol., 2011

A systems biology approach to analyse leaf carbohydrate metabolism in Arabidopsis thaliana.

Sebastian Henkel, Thomas Nägele, Imke Hörmiller, Thomas Sauter, Oliver Sawodny, Michael Ederer, Arnd G. Heyer

EURASIP J. Bioinform. Syst. Biol., 2011

A Study of the PDGF Signaling Pathway with PRISM

Qixia Yuan, Jun Pang, Sjouke Mauw, Panuwat Trairatphisan, Monique Wiesinger, Thomas Sauter

Proceedings of the Proceedings Third International Workshop on Computational Models for Cell Processes, 2011

2009

ON/OFF and Beyond - A Boolean Model of Apoptosis.

Rebekka Schlatter, Kathrin Schmich, Ima Avalos Vizcarra, Peter Scheurich, Thomas Sauter, Christoph Borner, Michael Ederer, Irmgard Merfort, Oliver Sawodny

PLoS Comput. Biol., 2009

Mechanism of PP2A-mediated IKKβ dephosphorylation: a systems biological approach.

Johannes Witt, Sandra Barisic, Eva Schumann, Frank Allgöwer, Oliver Sawodny, Thomas Sauter, Dagmar Kulms

BMC Syst. Biol., 2009

2008

Analyse der evolutiven Adaptation am Beispiel einer pyruvat-auxotrophen Escherichia coli-Mutante (Analysis of the Evolutive Adaptation of a Pyruvate-auxotrophic Escherichia coli Mutant).

Ronny Feuer, Michael Ederer, Ernst Dieter Gilles, Georg A. Sprenger, Oliver Sawodny, Thomas Sauter

Autom., 2008

2006

A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks.

Holger Conzelmann, Julio Saez-Rodriguez, Thomas Sauter, Boris N. Kholodenko, Ernst Dieter Gilles

BMC Bioinform., 2006

2004

Praxisbericht: Horizontale und vertikale Integration am Beispiel des Aufragsmanagemenst bei der MCG der DaimlerChrysler AG.

Rainer Schrapel, Thomas Sauter

Proceedings of the 34. Jahrestagung der Gesellschaft für Informatik, 2004

2003

An Approach for Dividing Models of Biological Reaction Networks into Functional Units.

Michael Ederer, Thomas Sauter, Eric Bullinger, Ernst Dieter Gilles, Frank Allgöwer

Simul., 2003

Towards Whole Cell "in Silico" Models for Cellular Systems: Model Set-up and Model Validation.

Andreas Kremling, Katja Bettenbrock, Sophia Fischer, Martin Ginkel, Thomas Sauter, Ernst Dieter Gilles

Proceedings of the Positive Systems, 2003