Travis J. Wheeler

According to our database1, Travis J. Wheeler authored at least 15 papers between 2005 and 2019.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

On csauthors.net:

Bibliography

2019
15 years of PhosphoSitePlus®: integrating post-translationally modified sites, disease variants and isoforms.
Nucleic Acids Res., 2019

2018
ULTRA: A Model Based Tool to Detect Tandem Repeats.
Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018

Splice-Aware Multiple Sequence Alignment of Protein Isoforms.
Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018

2016
The Dfam database of repetitive DNA families.
Nucleic Acids Res., 2016

2015
HMMER web server: 2015 update.
Nucleic Acids Res., 2015

2014
Skylign: a tool for creating informative, interactive logos representing sequence alignments and profile hidden Markov models.
BMC Bioinform., 2014

2013
Dfam: a database of repetitive DNA based on profile hidden Markov models.
Nucleic Acids Res., 2013

nhmmer: DNA homology search with profile HMMs.
Bioinform., 2013

2012
Estimating the Accuracy of Multiple Alignments and its Use in Parameter Advising.
Proceedings of the Research in Computational Molecular Biology, 2012

2010
Aligning Protein Sequences with Predicted Secondary Structure.
J. Comput. Biol., 2010

2009
Efficient Construction of accurate Multiple alignments and Large-Scale phylogenies.
PhD thesis, 2009

Large-Scale Neighbor-Joining with NINJA.
Proceedings of the Algorithms in Bioinformatics, 9th International Workshop, 2009

Learning Models for Aligning Protein Sequences with Predicted Secondary Structure.
Proceedings of the Research in Computational Molecular Biology, 2009

2007
Multiple alignment by aligning alignments.
Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007

2005
Evaluating and improving cDNA sequence quality with cQC.
Bioinform., 2005


  Loading...