Ulisses Dias

Gabriel Siqueira

Proceedings of the Comparative Genomics - 21st International Conference, 2024

2023

Reversal and Transposition Distance on Unbalanced Genomes Using Intergenic Information.

[BibT_eX]

[DOI]

J. Comput. Biol., August, 2023

Rearrangement distance with reversals, indels, and moves in intergenic regions on signed and unsigned permutations.

[BibT_eX]

[DOI]

J. Bioinform. Comput. Biol., April, 2023

Genome Rearrangement Distance With a Flexible Intergenic Regions Aspect.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

Reversal and Indel Distance With Intergenic Region Information.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

Approximation algorithms for sorting by k-cuts on signed permutations.

[BibT_eX]

[DOI]

J. Comb. Optim., 2023

Block Interchange and Reversal Distance on Unbalanced Genomes.

[BibT_eX]

[DOI]

Gabriel Siqueira

Proceedings of the Advances in Bioinformatics and Computational Biology, 2023

2022

Labeled Cycle Graph for Transposition and Indel Distance.

[BibT_eX]

[DOI]

J. Comput. Biol., 2022

A 1.375-Approximation Algorithm for Sorting by Transpositions with Faster Running Time.

[BibT_eX]

[DOI]

Proceedings of the Advances in Bioinformatics and Computational Biology, 2022

Sorting by k-Cuts on Signed Permutations.

[BibT_eX]

[DOI]

Proceedings of the Comparative Genomics - 19th International Conference, 2022

A New Approach for the Reversal Distance with Indels and Moves in Intergenic Regions.

[BibT_eX]

[DOI]

Proceedings of the Comparative Genomics - 19th International Conference, 2022

Transposition Distance Considering Intergenic Regions for Unbalanced Genomes.

[BibT_eX]

[DOI]

Proceedings of the Bioinformatics Research and Applications - 18th International Symposium, 2022

2021

Heuristics for Genome Rearrangement Distance With Replicated Genes.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2021

Sorting Permutations by Intergenic Operations.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2021

Sorting Signed Permutations by Intergenic Reversals.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2021

Genome Rearrangement Distance with Reversals, Transpositions, and Indels.

[BibT_eX]

[DOI]

J. Comput. Biol., 2021

Reversals and transpositions distance with proportion restriction.

[BibT_eX]

[DOI]

J. Bioinform. Comput. Biol., 2021

Incorporating intergenic regions into reversal and transposition distances with indels.

[BibT_eX]

[DOI]

J. Bioinform. Comput. Biol., 2021

An improved approximation algorithm for the reversal and transposition distance considering gene order and intergenic sizes.

[BibT_eX]

[DOI]

Algorithms Mol. Biol., 2021

Reversal and Transposition Distance of Genomes Considering Flexible Intergenic Regions.

[BibT_eX]

[DOI]

Proceedings of the XI Latin and American Algorithms, Graphs and Optimization Symposium, 2021

Reversals Distance Considering Flexible Intergenic Regions Sizes.

[BibT_eX]

[DOI]

Proceedings of the Algorithms for Computational Biology - 8th International Conference, 2021

Reversal Distance on Genomes with Different Gene Content and Intergenic Regions Information.

[BibT_eX]

[DOI]

Proceedings of the Algorithms for Computational Biology - 8th International Conference, 2021

2020

Heuristics for the Reversal and Transposition Distance Problem.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2020

A Multirepresentational Fusion of Time Series for Pixelwise Classification.

[BibT_eX]

[DOI]

Allan da Silva Pinto

Rubens A. C. Lamparelli

Guerric le Maire

Ricardo da Silva Torres

IEEE J. Sel. Top. Appl. Earth Obs. Remote. Sens., 2020

Image-Based Time Series Representations for Pixelwise Eucalyptus Region Classification: A Comparative Study.

[BibT_eX]

[DOI]

Nathalia Menini

Rubens A. C. Lamparelli

Guerric le Maire

Ricardo da Silva Torres

IEEE Geosci. Remote. Sens. Lett., 2020

On the Complexity of Some Variations of Sorting by Transpositions.

[BibT_eX]

[DOI]

J. Univers. Comput. Sci., 2020

Sorting by Genome Rearrangements on Both Gene Order and Intergenic Sizes.

[BibT_eX]

[DOI]

Géraldine Jean

Guillaume Fertin

J. Comput. Biol., 2020

Sorting by Reversals and Transpositions with Proportion Restriction.

[BibT_eX]

[DOI]

Proceedings of the Advances in Bioinformatics and Computational Biology, 2020

Heuristics for Reversal Distance Between Genomes with Duplicated Genes.

[BibT_eX]

[DOI]

Proceedings of the Algorithms for Computational Biology, 2020

A 3.5-Approximation Algorithm for Sorting by Intergenic Transpositions.

[BibT_eX]

[DOI]

Proceedings of the Algorithms for Computational Biology, 2020

2019

On the Complexity of Sorting by Reversals and Transpositions Problems.

[BibT_eX]

[DOI]

J. Comput. Biol., 2019

Sorting by Weighted Reversals and Transpositions.

[BibT_eX]

[DOI]

J. Comput. Biol., 2019

Super short operations on both gene order and intergenic sizes.

[BibT_eX]

[DOI]

Algorithms Mol. Biol., 2019

Block-Interchange Distance Considering Intergenic Regions.

[BibT_eX]

[DOI]

Proceedings of the Advances in Bioinformatics and Computational Biology, 2019

Sorting by Reversals, Transpositions, and Indels on Both Gene Order and Intergenic Sizes.

[BibT_eX]

[DOI]

Géraldine Jean

Guillaume Fertin

Proceedings of the Bioinformatics Research and Applications - 15th International Symposium, 2019

Pixelwise Remote Sensing Image Classification Based on Recurrence Plot Deep Features.

[BibT_eX]

[DOI]

Nathalia Menini

Rubens A. C. Lamparelli

Guerric le Maire

Ricardo da Silva Torres

Proceedings of the 2019 IEEE International Geoscience and Remote Sensing Symposium, 2019

2018

A GRASP-Based Heuristic for the Sorting by Length-Weighted Inversions Problem.

[BibT_eX]

[DOI]

Thiago da Silva Arruda

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

Sorting signed circular permutations by super short operations.

[BibT_eX]

[DOI]

Guillaume Fertin

Algorithms Mol. Biol., 2018

Super Short Reversals on Both Gene Order and Intergenic Sizes.

[BibT_eX]

[DOI]

Proceedings of the Advances in Bioinformatics and Computational Biology, 2018

Flood Detection from Social Multimedia and Satellite Images Using Ensemble and Transfer Learning with CNN Architectures.

[BibT_eX]

[DOI]

Proceedings of the Working Notes Proceedings of the MediaEval 2018 Workshop, 2018

Transfer Learning with CNN Architectures for Classifying Gastrointestinal Diseases and Anatomical Landmarks.

[BibT_eX]

[DOI]

Proceedings of the Working Notes Proceedings of the MediaEval 2018 Workshop, 2018

Heuristics for the Sorting Signed Permutations by Reversals and Transpositions Problem.

[BibT_eX]

[DOI]

Proceedings of the Algorithms for Computational Biology - 5th International Conference, 2018

2017

On the Sorting by Reversals and Transpositions Problem.

[BibT_eX]

[DOI]

J. Univers. Comput. Sci., 2017

2015

Sorting by weighted inversions considering length and symmetry.

[BibT_eX]

[DOI]

Christian Baudet

BMC Bioinform., December, 2015

Sorting by Prefix Reversals and Prefix Transpositions.

[BibT_eX]

[DOI]

Discret. Appl. Math., 2015

2014

A general heuristic for genome rearrangement problems.

[BibT_eX]

[DOI]

Gustavo Rodrigues Galvão

Carla Negri Lintzmayer

J. Bioinform. Comput. Biol., 2014

Length and Symmetry on the Sorting by Weighted Inversions Problem.

[BibT_eX]

[DOI]

Christian Baudet

Proceedings of the Advances in Bioinformatics and Computational Biology, 2014

An improved algorithm for the sorting by reversals and transpositions problem.

[BibT_eX]

[DOI]

Proceedings of the 5th ACM Conference on Bioinformatics, 2014

Heuristics for the Sorting by Length-Weighted Inversions Problem on Signed Permutations.

[BibT_eX]

[DOI]

Thiago da Silva Arruda

Proceedings of the Algorithms for Computational Biology - First International Conference, 2014

2013

Heuristics for the Transposition Distance Problem.

[BibT_eX]

[DOI]

J. Bioinform. Comput. Biol., 2013

Greedy Randomized Search Procedure to Sort Genomes using Symmetric, Almost-Symmetric and Unitary Inversions.

[BibT_eX]

[DOI]

Christian Baudet

Proceedings of the ACM Conference on Bioinformatics, 2013

Heuristics for the Sorting by Length-Weighted Inversion Problem.

[BibT_eX]

[DOI]

Thiago da Silva Arruda

Proceedings of the ACM Conference on Bioinformatics, 2013

2012

Genoma comparison problems.

[BibT_eX]

[DOI]

PhD thesis, 2012

SIS: a program to generate draft genome sequence scaffolds for prokaryotes.

[BibT_eX]

[DOI]

João C. Setubal

BMC Bioinform., 2012

Sorting genomes using almost-symmetric inversions.

[BibT_eX]

[DOI]

Proceedings of the ACM Symposium on Applied Computing, 2012

2011

Using inversion signatures to generate draft genome sequence scaffolds.

[BibT_eX]

[DOI]

João C. Setubal

Proceedings of the ACM International Conference on Bioinformatics, 2011

2010

A Simulation Tool for the Study of Symmetric Inversions in Bacterial Genomes.

[BibT_eX]

[DOI]

João C. Setubal

Proceedings of the Comparative Genomics - International Workshop, 2010

An improved 1.375-approximation algorithm for the transposition distance problem.

[BibT_eX]

[DOI]

Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2009

Constraint Programming Models for Transposition Distance Problem.

[BibT_eX]

[DOI]