W. Evan Johnson

Orcid: 0000-0002-6247-6595

Affiliations:
  • Boston University, School of Public Health, Department of Biostatistics, MA, USA


According to our database1, W. Evan Johnson authored at least 13 papers between 2010 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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Links

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Bibliography

2023
Interactive analysis of single-cell data using flexible workflows with SCTK2.
Patterns, August, 2023

ICAT: a novel algorithm to robustly identify cell states following perturbations in single-cell transcriptomes.
Bioinform., May, 2023

2021
Robustifying genomic classifiers to batch effects via ensemble learning.
Bioinform., 2021

2019
scruff: an R/Bioconductor package for preprocessing single-cell RNA-sequencing data.
BMC Bioinform., 2019

2018
Alternative empirical Bayes models for adjusting for batch effects in genomic studies.
BMC Bioinform., 2018

2016
BatchQC: interactive software for evaluating sample and batch effects in genomic data.
Bioinform., 2016

2015
ASSIGN: context-specific genomic profiling of multiple heterogeneous biological pathways.
Bioinform., 2015

Alternative preprocessing of RNA-Sequencing data in The Cancer Genome Atlas leads to improved analysis results.
Bioinform., 2015

2013
Probabilistic alignment leads to improved accuracy and read coverage for bisulfite sequencing data.
BMC Bioinform., 2013

2012
The sva package for removing batch effects and other unwanted variation in high-throughput experiments.
Bioinform., 2012

Parallel Pair-HMM SNP Detection.
Proceedings of the 26th IEEE International Parallel and Distributed Processing Symposium Workshops & PhD Forum, 2012

2011
Parallel Mapping Approaches for GNUMAP.
Proceedings of the 25th IEEE International Symposium on Parallel and Distributed Processing, 2011

2010
The GNUMAP algorithm: unbiased probabilistic mapping of oligonucleotides from next-generation sequencing.
Bioinform., 2010


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