Wing-Kin Sung
Orcid: 0000-0001-7806-7086Affiliations:
- National University of Singapore (NUS)
According to our database1,
Wing-Kin Sung
authored at least 181 papers
between 1996 and 2024.
Collaborative distances:
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Bibliography
2024
Proceedings of the 41st International Symposium on Theoretical Aspects of Computer Science, 2024
2023
Comput. Biol. Medicine, May, 2023
Distribution based MIL pooling filters: Experiments on a lymph node metastases dataset.
Medical Image Anal., 2023
Proceedings of the WALCOM: Algorithms and Computation, 2023
Proceedings of the 34th Annual Symposium on Combinatorial Pattern Matching, 2023
2022
Oner, Sung, and Lee: Researchers in digital pathology for the future of modern medicine.
Patterns, 2022
An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases.
Patterns, 2022
Obtaining spatially resolved tumor purity maps using deep multiple instance learning in a pan-cancer study.
Patterns, 2022
ASMdb: a comprehensive database for allele-specific DNA methylation in diverse organisms.
Nucleic Acids Res., 2022
2021
Theor. Comput. Sci., 2021
Bioinform., 2021
SurVIndel: improving CNV calling from high-throughput sequencing data through statistical testing.
Bioinform., 2021
Algorithmica, 2021
2020
MethHaplo: combining allele-specific DNA methylation and SNPs for haplotype region identification.
BMC Bioinform., 2020
Proceedings of the 8th International Conference on Learning Representations, 2020
2019
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019
Theor. Comput. Sci., 2019
J. Comput. Biol., 2019
An integrated package for bisulfite DNA methylation data analysis with Indel-sensitive mapping.
BMC Bioinform., 2019
Proceedings of the WALCOM: Algorithms and Computation - 13th International Conference, 2019
Proceedings of the WALCOM: Algorithms and Computation - 13th International Conference, 2019
2018
Algorithms for the Majority Rule (+) Consensus Tree and the Frequency Difference Consensus Tree.
IEEE ACM Trans. Comput. Biol. Bioinform., 2018
J. Comput. Biol., 2018
Proceedings of the 45th International Colloquium on Automata, Languages, and Programming, 2018
2017
BMC Bioinform., 2017
Computing Asymmetric Median Tree of Two Trees via Better Bipartite Matching Algorithm.
Proceedings of the Combinatorial Algorithms - 28th International Workshop, 2017
2016
Encyclopedia of Algorithms, 2016
Proceedings of the 41st International Symposium on Mathematical Foundations of Computer Science, 2016
2015
IEEE ACM Trans. Comput. Biol. Bioinform., 2015
Linked Dynamic Tries with Applications to LZ-Compression in Sublinear Time and Space.
Algorithmica, 2015
2014
IEEE ACM Trans. Comput. Biol. Bioinform., 2014
2013
NII Shonan Meet. Rep., 2013
J. Comput. Biol., 2013
Simultaneously Learning DNA Motif Along with Its Position and Sequence Rank Preferences Through Expectation Maximization Algorithm.
J. Comput. Biol., 2013
J. Bioinform. Comput. Biol., 2013
International Conference on Genome Informatics (GIW 2013) in Singapore: introduction to the systems biology contributions.
BMC Syst. Biol., 2013
Algorithmica, 2013
Algorithms for the Majority Rule (+) Consensus Tree and the Frequency Difference Consensus Tree.
Proceedings of the Algorithms in Bioinformatics - 13th International Workshop, 2013
Inference of Spatial Organizations of Chromosomes Using Semi-definite Embedding Approach and Hi-C Data.
Proceedings of the Research in Computational Molecular Biology, 2013
Proceedings of the Research in Computational Molecular Biology, 2013
Proceedings of the Bioinformatics Research and Applications, 9th International Symposium, 2013
2012
Theor. Comput. Sci., 2012
J. Comput. Syst. Sci., 2012
Simultaneously Learning DNA Motif along with Its Position and Sequence Rank Preferences through EM Algorithm.
Proceedings of the Research in Computational Molecular Biology, 2012
Proceedings of the Automata, Languages, and Programming - 39th International Colloquium, 2012
2011
Succinct data structures for Searchable Partial Sums with optimal worst-case performance.
Theor. Comput. Sci., 2011
IEEE ACM Trans. Comput. Biol. Bioinform., 2011
Partial convex recolorings of trees and galled networks: Tight upper and lower bounds.
ACM Trans. Algorithms, 2011
Nucleic Acids Res., 2011
J. Comput. Biol., 2011
Opera: Reconstructing Optimal Genomic Scaffolds with High-Throughput Paired-End Sequences.
J. Comput. Biol., 2011
Bioinform., 2011
Algorithmica, 2011
Proceedings of the Algorithms and Computation - 22nd International Symposium, 2011
Proceedings of the IEEE International Conference on Information Reuse and Integration, 2011
2010
Bioinform., 2010
SLiM on Diet: finding short linear motifs on domain interaction interfaces in Protein Data Bank.
Bioinform., 2010
Proceedings of the Algorithmic Aspects in Information and Management, 2010
2009
SIAM J. Comput., 2009
J. Bioinform. Comput. Biol., 2009
Proceedings of the Algorithms in Bioinformatics, 9th International Workshop, 2009
Proceedings of the Algorithms and Computation, 20th International Symposium, 2009
Proceedings of the Bioinformatics and Computational Biology, 2009
2008
Proceedings of the Encyclopedia of Algorithms - 2008 Edition, 2008
Proceedings of the Encyclopedia of Algorithms - 2008 Edition, 2008
Proceedings of the Encyclopedia of Algorithms - 2008 Edition, 2008
RB-Finder: An Improved Distance-Based Sliding Window Method to Detect Recombination Breakpoints.
J. Comput. Biol., 2008
J. Comput. Biol., 2008
J. Bioinform. Comput. Biol., 2008
LOMA: A fast method to generate efficient tagged-random primers despite amplification bias of random PCR on pathogens.
BMC Bioinform., 2008
An HMM approach to genome-wide identification of differential histone modification sites from ChIP-seq data.
Bioinform., 2008
MotifVoter: a novel ensemble method for fine-grained integration of generic motif finders.
Bioinform., 2008
Algorithmica, 2008
Fixed Parameter Polynomial Time Algorithms for Maximum Agreement and Compatible Supertrees.
Proceedings of the STACS 2008, 2008
A Streamlined and Generalized Analysis of Chromatin ImmunoPrecipitation Paired-End diTag Data.
Proceedings of the Computational Science, 2008
2007
Reconstructing Recombination Network from Sequence Data: The Small Parsimony Problem.
IEEE ACM Trans. Comput. Biol. Bioinform., 2007
Fast algorithms for computing the tripartition-based distance between phylogenetic networks.
J. Comb. Optim., 2007
Identifying differentially expressed genes in Time-Course microarray Experiment without Replicate.
J. Bioinform. Comput. Biol., 2007
BMC Bioinform., 2007
An efficient strategy for extensive integration of diverse biological data for protein function prediction.
Bioinform., 2007
Algorithmica, 2007
The Point Placement Problem on a Line - Improved Bounds for Pairwise Distance Queries.
Proceedings of the Algorithms in Bioinformatics, 7th International Workshop, 2007
Proceedings of the Eighteenth Annual ACM-SIAM Symposium on Discrete Algorithms, 2007
Proceedings of the Algorithms and Computation, 18th International Symposium, 2007
CPS-tree: A Compact Partitioned Suffix Tree for Disk-based Indexing on Large Genome Sequences.
Proceedings of the 23rd International Conference on Data Engineering, 2007
Compressed Dynamic Tries with Applications to LZ-Compression in Sublinear Time and Space.
Proceedings of the FSTTCS 2007: Foundations of Software Technology and Theoretical Computer Science, 2007
Proceedings of the Combinatorial Optimization and Applications, 2007
2006
Theor. Comput. Sci., 2006
Theor. Comput. Sci., 2006
SIAM J. Comput., 2006
Local Gapped Subforest Alignment and Its Application in Finding RNA Structural Motifs.
J. Comput. Biol., 2006
J. Bioinform. Comput. Biol., 2006
Int. J. Artif. Intell. Tools, 2006
Comput. Biol. Medicine, 2006
A correlated motif approach for finding short linear motifs from protein interaction networks.
BMC Bioinform., 2006
PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data.
BMC Bioinform., 2006
Exploiting indirect neighbours and topological weight to predict protein function from protein-protein interactions.
Bioinform., 2006
A Faster and More Space-Efficient Algorithm for Inferring Arc-Annotations of RNA Sequences through Alignment.
Algorithmica, 2006
LocalMotif - An In-Silico Tool for Detecting Localized Motifs in Regulatory Sequences.
Proceedings of the 18th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2006), 2006
Proceedings of the 18th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2006), 2006
Differential Friendly Neighbors Algorithm for Differential Relationships Based Gene Selection and Classification using Microarray Data.
Proceedings of the 2006 International Conference on Data Mining, 2006
2005
J. Bioinform. Comput. Biol., 2005
Protein Structure and Fold Prediction Using Tree-augmented Naïve Bayesian Classifier.
J. Bioinform. Comput. Biol., 2005
Protein subcellular localization prediction for Gram-negative bacteria using amino acid subalphabets and a combination of multiple support vector machines.
BMC Bioinform., 2005
Computational modeling of oligonucleotide positional densities for human promoter prediction.
Artif. Intell. Medicine, 2005
Proceedings of the Structural Information and Communication Complexity, 2005
Proceedings of the Research in Computational Molecular Biology, 2005
Proceedings of the IEEE 7th Workshop on Multimedia Signal Processing, 2005
ConstrainedMotif: A Periodicity Constraint Based Algorithm to Predict Cell-Cycle Associated Promoter Motifs Using Time-Course Gene Expression Data.
Proceedings of the Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 2005
Multimodality as a Criterion for Feature Selection in Unsupervised Analysis of Gene Expression Data.
Proceedings of the Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 2005
Allowing mismatches in anchors for wholw genome alignment: Generation and effectiveness.
Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore, 2005
Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore, 2005
2004
Inf. Process. Lett., 2004
Int. J. Found. Comput. Sci., 2004
Proceedings of Computing: The Australasian Theory Symposium, 2004
Proceedings of the Biocomputing 2004, 2004
Proceedings of the Algorithms and Computation, 15th International Symposium, 2004
Proceedings of the 16th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2004), 2004
Proceedings of the 2004 International Conference on Image Processing, 2004
Gene Network Modeling through Semi-Fixed Bayesian Network.
Proceedings of the 16th Eureopean Conference on Artificial Intelligence, 2004
Proceedings of the 2004 Data Compression Conference (DCC 2004), 2004
Discovering Novel Interacting Motif Pairs from Large Protein-Protein Interaction Datasets.
Proceedings of the 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 2004
Proceedings of the 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 2004
A Mutation-Sensitive Approach for Locating Conserved Gene Pairs between Related Species.
Proceedings of the 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 2004
Practical aspects of Compressed Suffix Arrays and FM-Index in Searching DNA Sequences.
Proceedings of the Sixth Workshop on Algorithm Engineering and Experiments and the First Workshop on Analytic Algorithmics and Combinatorics, 2004
2003
Predicting RNA Secondary Structures with Arbitrary Pseudoknots by Maximizing the Number of Stacking Pairs.
J. Comput. Biol., 2003
Proceedings of the Algorithms and Computation, 14th International Symposium, 2003
Proceedings of the Algorithms and Computation, 14th International Symposium, 2003
Tag SNP selection by brute-force and heuristic algorithms.
Proceedings of the German Conference on Bioinformatics, 2003
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003
Proceedings of the Computing and Combinatorics, 9th Annual International Conference, 2003
Proceedings of the Computer Analysis of Images and Patterns, 10th International Conference, 2003
2002
IEEE Trans. Syst. Man Cybern. Part C, 2002
Improved Phylogeny Comparisons: Non-Shared Edges Nearest Neighbor Interchanges, and Subtree Transfers
CoRR, 2002
Proceedings of the Algorithms in Bioinformatics, Second International Workshop, 2002
Proceedings of the Computing and Combinatorics, 8th Annual International Conference, 2002
2001
SIAM J. Comput., 2001
An Even Faster and More Unifying Algorithm for Comparing Trees via Unbalanced Bipartite Matchings.
J. Algorithms, 2001
Pervasive Multimedia Markup Language (PMML): an XML-based multimedia content specification for pervasive access.
Proceedings of the Poster Proceedings of the Tenth International World Wide Web Conference, 2001
2000
SIAM J. Comput., 2000
Proceedings of the Second International Workshop on Advance Issues of E-Commerce and Web-Based Information Systems (WECWIS 2000), 2000
Unbalanced and Hierarchical Bipartite Matchings with Applications to Labeled Tree Comparison.
Proceedings of the Algorithms and Computation, 11th International Conference, 2000
Proceedings of the Combinatorial Pattern Matching, 11th Annual Symposium, 2000
1999
A Decomposition Theorem for Maximum Weight Bipartite Matchings with Applications to Evolutionary Trees.
Proceedings of the Algorithms, 1999
1998
Default-Sensitive PreProcessings for Finding Maxima.
Proceedings of Computing: The Fourth Australasian Theory Symposium (CATS'98), 1998
1997
Proceedings of the Twenty-Ninth Annual ACM Symposium on the Theory of Computing, 1997
Proceedings of the Algorithms and Computation, 8th International Symposium, 1997
1996
Computing the Unrooted Maximum Agreement Subtree in Sub-quadratic Time.
Nord. J. Comput., 1996