Thomas K. F. Wong

Orcid: 0000-0002-0580-6324

According to our database1, Thomas K. F. Wong authored at least 28 papers between 2007 and 2021.

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Bibliography

2021
An assembly-free method of phylogeny reconstruction using short-read sequences from pooled samples without barcodes.
PLoS Comput. Biol., 2021

2020
Correction to: Effective machine-learning assembly for next-generation amplicon sequencing with very low coverage.
BMC Bioinform., 2020

2019
Effective machine-learning assembly for next-generation amplicon sequencing with very low coverage.
BMC Bioinform., 2019

2018
HaploJuice : accurate haplotype assembly from a pool of sequences with known relative concentrations.
BMC Bioinform., 2018

2014
Computational identification of protein binding sites on RNAs using high-throughput RNA structure-probing data.
Bioinform., 2014

2013
A Local Structural Prediction Algorithm for RNA Triple Helix Structure.
Proceedings of the Pattern Recognition in Bioinformatics, 2013

Comparison of Cutoff Strategies for Geometrical Features in Machine Learning-Based Scoring Functions.
Proceedings of the Advanced Data Mining and Applications - 9th International Conference, 2013

2012
Memory Efficient Algorithms for Structural Alignment of RNAs with Pseudoknots.
IEEE ACM Trans. Comput. Biol. Bioinform., 2012

An Efficient Alignment Algorithm for Searching Simple Pseudoknots over Long Genomic Sequence.
IEEE ACM Trans. Comput. Biol. Bioinform., 2012

Structural Alignment of RNA with Triple Helix Structure.
J. Comput. Biol., 2012

SOAP3: ultra-fast GPU-based parallel alignment tool for short reads.
Bioinform., 2012

Efficient SNP-sensitive alignment and database-assisted SNP calling for low coverage samples.
Proceedings of the ACM International Conference on Bioinformatics, 2012

2011
Structural Alignment of RNA with Complex Pseudoknot Structure.
J. Comput. Biol., 2011

RNASAlign: RNA Structural Alignment System.
Bioinform., 2011

Algorithms for pseudoknot classification.
Proceedings of the ACM International Conference on Bioinformatics, 2011

Detection of novel tandem duplication with next-generation sequencing.
Proceedings of the ACM International Conference on Bioinformatics, 2011

Structural Alignment of RNAs with Pseudoknots.
Proceedings of the Handbook of Research on Computational and Systems Biology, 2011

2010
Improving the accuracy of signal transduction pathway construction using level-2 neighbours.
Int. J. Bioinform. Res. Appl., 2010

Local Structural Alignment of RNA with Affine Gap Model.
Proceedings of the Bioinformatics Research and Applications, 6th International Symposium, 2010

Prediction of Minimum Free Energy Structure for Simple Non-standard Pseudoknot.
Proceedings of the Biomedical Engineering Systems and Technologies, 2010

Structure Prediction of Simple Non-standard Pseudoknot.
Proceedings of the BIOINFORMATICS 2010, 2010

Investigation of the Lineage and Tissue Specificity of Genes.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2010

2009
Correcting short reads with high error rates for improved sequencing result.
Int. J. Bioinform. Res. Appl., 2009

Structural Alignment of RNA with Complex Pseudoknot Structure.
Proceedings of the Algorithms in Bioinformatics, 9th International Workshop, 2009

The 2-Interval Pattern Matching Problems and Its Application to ncRNA Scanning.
Proceedings of the Bioinformatics and Computational Biology, 2009

2008
Finding Alternative Splicing Patterns with Strong Support from expressed Sequences on Individual exons/introns.
J. Bioinform. Comput. Biol., 2008

A Memory Efficient Algorithm for Structural Alignment of RNAs with Embedded Simple Pseudoknots.
Proceedings of the 6th Asia-Pacific Bioinformatics Conference, 2008

2007
Finding Alternative Splicing Patterns with Strong Support From Expressed Sequences.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007


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