Xiaowei Zhan

According to our database, Xiaowei Zhan authored at least 18 papers between 2014 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2026

Deep reflective reasoning in interdependence constrained structured data extraction from clinical notes for digital health.

Jingwei Huang, Kuroush Nezafati, Zhikai Chi, Ruichen Rong, Colin Treager, Tingyi Wanyan, Yueshuang Xu, Xiaowei Zhan, Patrick Leavey, Guanghua Xiao, Wenqi Shi, Yang Xie

CoRR, March, 2026

GNN-EGG: Graph neural network explanations via graph generation.

Art Taychameekiatchai, Liwei Jia, Zhikai Chi, Yueshuang Xu, Qin Zhou, Guanghua Xiao, Xiaowei Zhan

Neurocomputing, 2026

2025

A Generalized Genetic Random Field Method for the Genetic Association Analysis of Sequencing Data.

Ming Li, Zihuai He, Min Zhang, Xiaowei Zhan, Changshuai Wei, Robert C. Elston, Qing Lu

CoRR, August, 2025

MiCoDe: a web tool for performing microbiome community detection using a Bayesian weighted stochastic block model.

Kevin C. Lutz, Shengjie Yang, Tejasv Bedi, Michael L. Neugent, Nikita Madhavaram, Bo Yao, Xiaowei Zhan, Nicole J. De Nisco, Qiwei Li

Bioinform., 2025

2024

A critical assessment of using ChatGPT for extracting structured data from clinical notes.

Jingwei Huang, Donghan M. Yang, Ruichen Rong, Kuroush Nezafati, Colin Treager, Zhikai Chi, Shidan Wang, Xian Cheng, Yujia Guo, Laura J. Klesse, Guanghua Xiao, Eric D. Peterson, Xiaowei Zhan, Yang Xie

npj Digit. Medicine, 2024

Navigating electronic health record accuracy by examination of sex incongruent conditions.

Ling Cai, Ralph J. Deberardinis, Xiaowei Zhan, Guanghua Xiao, Yang Xie

J. Am. Medical Informatics Assoc., 2024

Large language models enabled multiagent ensemble method for efficient EHR data labeling.

Jingwei Huang, Kuroush Nezafati, Ismael Villanueva-Miranda, Zifan Gu, Ann Marie Navar, Tingyi Wanyan, Qin Zhou, Bo Yao, Ruichen Rong, Xiaowei Zhan, Guanghua Xiao, Eric D. Peterson, Donghan M. Yang, Yang Xie

CoRR, 2024

2023

Unsupervised domain adaptation for nuclei segmentation: Adapting from hematoxylin & eosin stained slides to immunohistochemistry stained slides using a curriculum approach.

Shidan Wang, Ruichen Rong, Zifan Gu, Junya Fujimoto, Xiaowei Zhan, Yang Xie, Guanghua Xiao

Comput. Methods Programs Biomed., November, 2023

2022

A Survey of Statistical Methods for Microbiome Data Analysis.

Kevin C. Lutz, Shuang Jiang, Michael L. Neugent, Nicole J. De Nisco, Xiaowei Zhan, Qiwei Li

Frontiers Appl. Math. Stat., 2022

2021

Spatial molecular profiling: platforms, applications and analysis tools.

Minzhe Zhang, Thomas Sheffield, Xiaowei Zhan, Qiwei Li, Donghan M. Yang, Yunguan Wang, Shidan Wang, Yang Xie, Tao Wang, Guanghua Xiao

Briefings Bioinform., 2021

2020

VAMPr: VAriant Mapping and Prediction of antibiotic resistance via explainable features and machine learning.

Jiwoong Kim, David E. Greenberg, Reed Pifer, Shuang Jiang, Guanghua Xiao, Samuel A. Shelburne, Andrew Y. Koh, Yang Xie, Xiaowei Zhan

PLoS Comput. Biol., 2020

Seqminer2: an efficient tool to query and retrieve genotypes for statistical genetics analyses from biobank scale sequence dataset.

Lina Yang, Shuang Jiang, Bibo Jiang, Dajiang J. Liu, Xiaowei Zhan

Bioinform., 2020

2019

DEFOR: depth- and frequency-based somatic copy number alteration detector.

He Zhang, Xiaowei Zhan, James Brugarolas, Yang Xie

Bioinform., 2019

2016

FMAP: Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies.

Jiwoong Kim, Min Soo Kim, Andrew Y. Koh, Yang Xie, Xiaowei Zhan

BMC Bioinform., 2016

RVTESTS: an efficient and comprehensive tool for rare variant association analysis using sequence data.

Xiaowei Zhan, Youna Hu, Bingshan Li, Gonçalo R. Abecasis, Dajiang J. Liu

Bioinform., 2016

2015

A Bayesian framework for <i>de novo</i> mutation calling in parents-offspring trios.

Qiang Wei, Xiaowei Zhan, Xue Zhong, Yongzhuang Liu, Yujun Han, Wei Chen, Bingshan Li

Bioinform., 2015

A haplotype-based framework for group-wise transmission/disequilibrium tests for rare variant association analysis.

Rui Chen, Qiang Wei, Xiaowei Zhan, Xue Zhong, James S. Sutcliffe, Nancy J. Cox, Edwin H. Cook Jr., Chun Li, Wei Chen, Bingshan Li

Bioinform., 2015

2014

RAREMETAL: fast and powerful meta-analysis for rare variants.

Shuang Feng, Dajiang Liu, Xiaowei Zhan, Mary Kate Wing, Gonçalo R. Abecasis

Bioinform., 2014