Youri Hoogstrate

According to our database, Youri Hoogstrate authored at least 6 papers between 2015 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2021

FASTAFS: file system virtualisation of random access compressed FASTA files.

Youri Hoogstrate, Guido Jenster, Harmen J. G. van de Werken

BMC Bioinform., 2021

2017

The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy.

Björn A. Grüning, Jörg Fallmann, Dilmurat Yusuf, Sebastian Will, Anika Erxleben, Florian Eggenhofer, Torsten Houwaart, Bérénice Batut, Pavankumar Videm, Andrea Bagnacani, Markus Wolfien, Steffen Lott, Youri Hoogstrate, Wolfgang R. Hess, Olaf Wolkenhauer, Steve Hoffmann, Altuna Akalin, Uwe Ohler, Peter F. Stadler, Rolf Backofen

Nucleic Acids Res., 2017

Systematically linking tranSMART, Galaxy and EGA for reusing human translational research data.

Chao Zhang, Jochem Bijlard, Christine Staiger, Serena A. Scollen, David van Enckevort, Youri Hoogstrate, Alexander Senf, Saskia D. Hiltemann, Susanna Repo, Wibo Pipping, Mariska Bierkens, Stefan Payralbe, Bas Stringer, Jaap Heringa, Andrew Stubbs, Luiz Olavo Bonino da Silva Santos, Jeroen Beliën, Ward Weistra, Rita Azevedo, Kees van Bochove, Gerrit Meijer, Jan-Willem Boiten, Jordi Rambla, Remond J. A. Fijneman, J. Dylan Spalding, Sanne Abeln

F1000Research, 2017

2016

Integration of EGA secure data access into Galaxy.

Youri Hoogstrate, Chao Zhang, Alexander Senf, Jochem Bijlard, Saskia D. Hiltemann, David van Enckevort, Susanna Repo, Jaap Heringa, Guido Jenster, Remond J. A. Fijneman, Jan-Willem Boiten, Gerrit A. Meijer, Andrew Stubbs, Jordi Rambla, J. Dylan Spalding, Sanne Abeln

F1000Research, 2016

FuMa: reporting overlap in RNA-seq detected fusion genes.

Youri Hoogstrate, René Böttcher, Saskia D. Hiltemann, Peter J. van der Spek, Guido Jenster, Andrew Stubbs

Bioinform., 2016

2015

FlaiMapper: computational annotation of small ncRNA-derived fragments using RNA-seq high-throughput data.

Youri Hoogstrate, Guido Jenster, Elena S. Martens-Uzunova

Bioinform., 2015