Sanne Abeln

According to our database1, Sanne Abeln authored at least 25 papers between 2005 and 2020.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.



In proceedings 
PhD thesis 


Online presence:



The hydrophobic effect characterises the thermodynamic signature of amyloid fibril growth.
PLoS Comput. Biol., 2020

Protein Three-Dimensional Structure Prediction.
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

SeRenDIP: SEquential REmasteriNg to DerIve profiles for fast and accurate predictions of PPI interface positions.
Bioinform., 2019

Tailor-made multiple sequence alignments using the PRALINE 2 alignment toolkit.
Bioinform., 2019

Motif-Aware PRALINE: Improving the alignment of motif regions.
PLoS Comput. Biol., 2018

Training for translation between disciplines: a philosophy for life and data sciences curricula.
Bioinform., 2018

metaModules identifies key functional subnetworks in microbiome-related disease.
Bioinform., 2016

ECCB 2016: The 15th European Conference on Computational Biology.
Bioinform., 2016

BioASF: a framework for automatically generating executable pathway models specified in BioPAX.
Bioinform., 2016

SCRY: Extending SPARQL with Custom Data Processing Methods for the Life Sciences.
Proceedings of the 9th International Conference Semantic Web Applications and Tools for Life Sciences, 2016

Mapping the Protein Fold Universe Using the CamTube Force Field in Molecular Dynamics Simulations.
PLoS Comput. Biol., 2015

The Hydrophobic Temperature Dependence of Amino Acids Directly Calculated from Protein Structures.
PLoS Comput. Biol., 2015

NGS-eval: NGS Error analysis and novel sequence VAriant detection tooL.
Nucleic Acids Res., 2015

SCRY: Enabling Quantitative Reasoning in SPARQL Queries.
Proceedings of the 8th Semantic Web Applications and Tools for Life Sciences International Conference, 2015

To SCRY Linked Data: Extending SPARQL the Easy Way.
Proceedings of the 1st International Diversity++ Workshop co-located with the 14th International Semantic Web Conference (ISWC 2015), 2015

Explaining disease using big data: How valid is your pathway?
Proceedings of the 2015 International Conference on High Performance Computing & Simulation, 2015

Coarse-grained versus atomistic simulations: realistic interaction free energies for real proteins.
Bioinform., 2014

Unraveling the outcome of 16S rDNA-based taxonomy analysis through mock data and simulations.
Bioinform., 2014

Exploring Fold Space Preferences of New-born and Ancient Protein Superfamilies.
PLoS Comput. Biol., 2013

Bioinformatics and Systems Biology: bridging the gap between heterogeneous student backgrounds.
Briefings Bioinform., 2013

Comparing clustering and pre-processing in taxonomy analysis.
Bioinform., 2012

Disordered Flanks Prevent Peptide Aggregation.
PLoS Comput. Biol., 2008

Using Phylogeny to Improve Genome-Wide Distant Homology Recognition.
PLoS Comput. Biol., 2007

Linking evolution of protein structures through fragments.
BMC Syst. Biol., 2007

How old is your fold?
Proceedings of the Proceedings Thirteenth International Conference on Intelligent Systems for Molecular Biology 2005, 2005