Zafer Aydin

According to our database, Zafer Aydin authored at least 33 papers between 2002 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Improved classification of colorectal polyps on histopathological images with ensemble learning and stain normalization.

Sena Busra Yengec Tasdemir, Zafer Aydin, Ebru Akay, Serkan Dogan, Bülent Yilmaz

Comput. Methods Programs Biomed., April, 2023

IGPRED-MultiTask: A Deep Learning Model to Predict Protein Secondary Structure, Torsion Angles and Solvent Accessibility.

Yasin Görmez, Zafer Aydin

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

2022

The Determination of Distinctive Single Nucleotide Polymorphism Sets for the Diagnosis of Behçet's Disease.

Yunus Emre Isik, Yasin Görmez, Zafer Aydin, Burcu Bakir-Gungor

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

2021

A noise-aware feature selection approach for classification.

Mostafa Sabzekar, Zafer Aydin

Soft Comput., 2021

Crowdsourcing digital health measures to predict Parkinson's disease severity: the Parkinson's Disease Digital Biomarker DREAM Challenge.

Solveig K. Sieberts, Jennifer Schaff, Marlena Duda, Bálint Á Pataki, Ming Sun, Phil Snyder, Jean-Francois Daneault, Federico Parisi, Gianluca Costante, Udi Rubin, Peter Banda, Yooree Chae, Elias Chaibub Neto, Earl Ray Dorsey, Zafer Aydin, Aipeng Chen, Laura L. Elo, Carlos Espino, Enrico Glaab, Ethan Goan, Fatemeh Noushin Golabchi, Yasin Görmez, Maria K. Jaakkola, Jitendra Jonnagaddala, Riku Klén, Dongmei Li, Christian McDaniel, Dimitri Perrin, Thanneer M. Perumal, Nastaran Mohammadian Rad, Erin Rainaldi, Stefano Sapienza, Patrick Schwab, Nikolai Shokhirev, Mikko S. Venäläinen, Gloria Vergara-Diaz, Yuqian Zhang, Avner G. S. Abrami, Aditya Adhikary, Carla Agurto, Sherry Bhalla, Halil Ibrahim Bilgin, Vittorio Caggiano, Jun Cheng, Eden Deng, Qiwei Gan, Rajan Girsa, Zhi Han, Stephen Heisig, Kun Huang, Samad Jahandideh, Wolfgang Kopp, Christoph F. Kurz, Gregor Lichtner, Raquel Norel, G. P. S. Raghava, Tavpritesh Sethi, Nicholas Shawen, Vaibhav Tripathi, Matthew Tsai, Tongxin Wang, Yi Wu, Jie Zhang, Xinyu Zhang, Yuanjia Wang, Yuanfang Guan, Daniela Brunner, Paolo Bonato, Lara M. Mangravite, Larsson Omberg

npj Digit. Medicine, 2021

Effect of interpolation on specular reflections in texture-based automatic colonic polyp detection.

Rukiye Nur Kaçmaz, Bülent Yilmaz, Zafer Aydin

Int. J. Imaging Syst. Technol., 2021

Data Mining Techniques in Direct Marketing on Imbalanced Data using Tomek Link Combined with Random Under-sampling.

Ümit Yilmaz, Cengiz Gezer, Zafer Aydin, Vehbi Çagri Güngör

Proceedings of the ICISDM 2021: 2021 the 5th International Conference on Information System and Data Mining, Silicon Valley, CA, USA, May 27, 2021

2020

A review of mammographic region of interest classification.

Sena Busra Yengec Tasdemir, Kasim Tasdemir, Zafer Aydin

WIREs Data Mining Knowl. Discov., 2020

Structural profile matrices for predicting structural properties of proteins.

Nuh Azginoglu, Zafer Aydin, Mete Celik

J. Bioinform. Comput. Biol., 2020

A deep learning approach with Bayesian optimization and ensemble classifiers for detecting denial of service attacks.

Yasin Gormez, Zafer Aydin, Ramazan Karademir, Vehbi C. Gungor

Int. J. Commun. Syst., 2020

Lung cancer subtype differentiation from positron emission tomography images.

Oguzhan Ayyildiz, Zafer Aydin, Bülent Yilmaz, Seyhan Karaçavus, Kübra Senkaya, Semra Içer, Arzu Tasdemir, Eser Kaya

Turkish J. Electr. Eng. Comput. Sci., 2020

Metabolic Imaging Based Sub-Classification of Lung Cancer.

Mustafa Bicakci, Oguzhan Ayyildiz, Zafer Aydin, Alper Bastürk, Seyhan Karaçavus, Bülent Yilmaz

IEEE Access, 2020

2019

Developing structural profile matrices for protein secondary structure and solvent accessibility prediction.

Zafer Aydin, Nuh Azginoglu, Halil Ibrahim Bilgin, Mete Celik

Bioinform., 2019

2018

Dimensionality reduction for protein secondary structure and solvent accesibility prediction.

Zafer Aydin, Oguz Kaynar, Yasin Gormez

J. Bioinform. Comput. Biol., 2018

Comparison of machine learning classifiers for protein secondary structure prediction.

Zafer Aydin, Oguz Kaynar, Yasin Gormez, Yunus Emre Isik

Proceedings of the 26th Signal Processing and Communications Applications Conference, 2018

Comparison of NR and UniClust databases for protein secondary structure prediction.

Zafer Aydin, Oguz Kaynar, Yasin Gormez

Proceedings of the 26th Signal Processing and Communications Applications Conference, 2018

ROI Detection in Mammogram Images Using Wavelet-Based Haralick and HOG Features.

Sena Busra Yengec Tasdemir, Kasim Tasdemir, Zafer Aydin

Proceedings of the 17th IEEE International Conference on Machine Learning and Applications, 2018

2017

Protein β-sheet prediction using an efficient dynamic programming algorithm.

Mostafa Sabzekar, Mahmoud Naghibzadeh, Mahdie Eghdami, Zafer Aydin

Comput. Biol. Chem., 2017

2015

BAUM-2: a multilingual audio-visual affective face database.

Cigdem Eroglu Erdem, Cigdem Turan, Zafer Aydin

Multim. Tools Appl., 2015

Template Scoring Methods for Protein Torsion Angle Prediction.

Zafer Aydin, David Baker, William Stafford Noble

Proceedings of the Biomedical Engineering Systems and Technologies, 2015

Constructing Structural Profiles for Protein Torsion Angle Prediction.

Zafer Aydin, David Baker, William Stafford Noble

Proceedings of the BIOINFORMATICS 2015, 2015

2013

A method for extraction of affective audio-visual facial clips from movies.

Cigdem Turan, Can Kansin, Sara Zhalehpour, Zafer Aydin, Cigdem Eroglu Erdem

Proceedings of the 21st Signal Processing and Communications Applications Conference, 2013

2011

Bayesian Models and Algorithms for Protein β-Sheet Prediction.

Zafer Aydin, Yucel Altunbasak, Hakan Erdogan

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

Learning sparse models for a dynamic Bayesian network classifier of protein secondary structure.

Zafer Aydin, Ajit P. Singh, Jeff A. Bilmes, William Stafford Noble

BMC Bioinform., 2011

2010

Using machine learning to speed up manual image annotation: application to a 3D imaging protocol for measuring single cell gene expression in the developing <i>C. elegans</i> embryo.

Zafer Aydin, John I. Murray, Robert H. Waterston, William Stafford Noble

BMC Bioinform., 2010

2008

Bayesian models and algoritms for protein secondary structure and beta-sheet prediction.

Zafer Aydin

PhD thesis, 2008

2007

Bayesian Protein Secondary Structure Prediction With Near-Optimal Segmentations.

Zafer Aydin, Yucel Altunbasak, Hakan Erdogan

IEEE Trans. Signal Process., 2007

Protein Fold Recognition using Residue-Based Alignments of Sequence and Secondary Structure.

Zafer Aydin, Hakan Erdogan, Yucel Altunbasak

Proceedings of the IEEE International Conference on Acoustics, 2007

2006

A signal processing application in genomic research: protein secondary structure prediction.

Zafer Aydin, Yucel Altunbasak

IEEE Signal Process. Mag., 2006

Protein secondary structure prediction for a single-sequence using hidden semi-Markov models.

Zafer Aydin, Yucel Altunbasak, Mark Borodovsky

BMC Bioinform., 2006

2005

A modified stack decoder for protein secondary structure prediction.

Zafer Aydin, Toygar Akgun, Yucel Altunbasak

Proceedings of the 2005 IEEE International Conference on Acoustics, 2005

2004

Protein secondary structure prediction with semi Markov HMMs.

Zafer Aydin, Yücel Altunbasak, Mark Borodovsky

Proceedings of the 2004 IEEE International Conference on Acoustics, 2004

2002

A new approach to time-frequency localized signal design.

Ahmet Kemal Özdemir, Zafer Aydin, Orhan Arikan

Proceedings of the IEEE International Conference on Acoustics, 2002