Zamin Iqbal

According to our database, Zamin Iqbal authored at least 10 papers between 2013 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

Benchmarking the empirical accuracy of short-read sequencing across the <i>M. tuberculosis</i> genome.

Maximillian G. Marin, Roger Vargas, Michael Harris, Brendan Jeffrey, L. Elaine Epperson, David Durbin, Michael Strong, Max Salfinger, Zamin Iqbal, Irada Akhundova, Sergo Vashakidze, Valeriu Crudu, Alex Rosenthal, Maha R. Farhat

Bioinform., 2022

ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads.

Martin Hunt, Jeremy Swann, Bede Constantinides, Philip Fowler, Zamin Iqbal

Bioinform., 2022

2020

REINDEER: efficient indexing of k-mer presence and abundance in sequencing datasets.

Camille Marchet, Zamin Iqbal, Daniel Gautheret, Mikaël Salson, Rayan Chikhi

Bioinform., 2020

2019

COBS: A Compact Bit-Sliced Signature Index.

Timo Bingmann, Phelim Bradley, Florian Gauger, Zamin Iqbal

Proceedings of the String Processing and Information Retrieval, 2019

2018

Machine learning for classifying tuberculosis drug-resistance from DNA sequencing data.

Yang Yang, Katherine E. Niehaus, Timothy M. Walker, Zamin Iqbal, A. Sarah Walker, Daniel J. Wilson, Tim E. A. Peto, Derrick W. Crook, E. Grace Smith, Tingting Zhu, David A. Clifton

Bioinform., 2018

Integrating long-range connectivity information into de Bruijn graphs.

Isaac Turner, Kiran V. Garimella, Zamin Iqbal, Gil McVean

Bioinform., 2018

2016

Inferring Strain Mixture within Clinical Plasmodium falciparum Isolates from Genomic Sequence Data.

John D. O'Brien, Zamin Iqbal, Jason P. Wendler, Lucas Amenga-Etego

PLoS Comput. Biol., 2016

High-Accuracy HLA Type Inference from Whole-Genome Sequencing Data Using Population Reference Graphs.

Alexander T. Dilthey, Pierre-Antoine Gourraud, Alexander J. Mentzer, Nezih Cereb, Zamin Iqbal, Gil McVean

PLoS Comput. Biol., 2016

A Natural Encoding of Genetic Variation in a Burrows-Wheeler Transform to Enable Mapping and Genome Inference.

Sorina Maciuca, Carlos del Ojo Elias, Gil McVean, Zamin Iqbal

Proceedings of the Algorithms in Bioinformatics - 16th International Workshop, 2016

2013

High-throughput microbial population genomics using the Cortex variation assembler.

Zamin Iqbal, Isaac Turner, Gil McVean

Bioinform., 2013