According to our database1, Alessandro Laio authored at least 16 papers between 2006 and 2020.
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Brain network dynamics during spontaneous strategy shifts and incremental task optimization.
The intrinsic dimension of protein sequence evolution.
PLoS Computational Biology, 2019
Clustering by the local intrinsic dimension: the hidden structure of real-world data.
Intrinsic dimension of data representations in deep neural networks.
Proceedings of the Advances in Neural Information Processing Systems 32: Annual Conference on Neural Information Processing Systems 2019, 2019
The permeation mechanism of organic cations through a CNG mimic channel.
PLoS Computational Biology, 2018
Estimating the intrinsic dimension of datasets by a minimal neighborhood information.
Automatic topography of high-dimensional data sets by non-parametric Density Peak clustering.
METAGUI 3: A graphical user interface for choosing the collective variables in molecular dynamics simulations.
Comput. Phys. Commun., 2017
Non-Markovian effects on protein sequence evolution due to site dependent substitution rates.
BMC Bioinform., 2016
QMMMW: A wrapper for QM/MM simulations with Quantum ESPRESSO and LAMMPS.
Comput. Phys. Commun., 2015
Metadynamics Simulations Reveal a Na+ Independent Exiting Path of Galactose for the Inward-Facing Conformation of vSGLT.
PLoS Computational Biology, 2014
BACHSCORE. A tool for evaluating efficiently and reliably the quality of large sets of protein structures.
Comput. Phys. Commun., 2013
METAGUI. A VMD interface for analyzing metadynamics and molecular dynamics simulations.
Comput. Phys. Commun., 2012
Exploring the Universe of Protein Structures beyond the Protein Data Bank.
PLoS Computational Biology, 2010
A Kinetic Model of Trp-Cage Folding from Multiple Biased Molecular Dynamics Simulations.
PLoS Computational Biology, 2009
A comparative theoretical study of dipeptide solvation in water.
J. Comput. Chem., 2006