Burkhard Morgenstern
Orcid: 0000-0002-7431-2862
According to our database1,
Burkhard Morgenstern
authored at least 70 papers
between 1996 and 2022.
Collaborative distances:
Collaborative distances:
Timeline
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Bibliography
2022
PLoS Comput. Biol., 2022
2021
2019
Read-SpaM: assembly-free and alignment-free comparison of bacterial genomes with low sequencing coverage.
BMC Bioinform., 2019
Accurate multiple alignment of distantly related genome sequences using filtered spaced word matches as anchor points.
Bioinform., 2019
2018
Multi-SpaM: A Maximum-Likelihood Approach to Phylogeny Reconstruction Using Multiple Spaced-Word Matches and Quartet Trees.
Proceedings of the Comparative Genomics - 16th International Conference, 2018
2017
Bioinform., 2017
Phylogeny reconstruction based on the length distribution of k-mismatch common substrings.
Algorithms Mol. Biol., 2017
2016
rasbhari: Optimizing Spaced Seeds for Database Searching, Read Mapping and Alignment-Free Sequence Comparison.
PLoS Comput. Biol., 2016
2015
RasBhari: optimizing spaced seeds for database searching, read mapping and alignment-free sequence comparison.
CoRR, 2015
Estimating evolutionary distances between genomic sequences from spaced-word matches.
Algorithms Mol. Biol., 2015
2014
<i>Spaced words</i> and <i>kmacs</i>: fast alignment-free sequence comparison based on inexact word matches.
Nucleic Acids Res., 2014
kmacs: the <i>k</i>-mismatch average common substring approach to alignment-free sequence comparison.
Bioinform., 2014
Bioinform., 2014
Proceedings of the Algorithms in Bioinformatics - 14th International Workshop, 2014
2013
DIALIGN at GOBICS - multiple sequence alignment using various sources of external information.
Nucleic Acids Res., 2013
Proceedings of the German Conference on Bioinformatics 2013, 2013
2012
jpHMM: recombination analysis in viruses with circular genomes such as the hepatitis B virus.
Nucleic Acids Res., 2012
Proceedings of the 12th IEEE International Conference on Bioinformatics & Bioengineering, 2012
2011
BMC Bioinform., 2011
MolabIS - An Integrated Information System for Storing and Managing Molecular Genetics Data.
BMC Bioinform., 2011
2010
DIALIGN-TX and multiple protein alignment using secondary structure information at GOBICS.
Nucleic Acids Res., 2010
A <i>min-cut</i> algorithm for the consistency problem in multiple sequence alignment.
Bioinform., 2010
2009
Nucleic Acids Res., 2009
OrthoSelect: a web server for selecting orthologous gene alignments from EST sequences.
Nucleic Acids Res., 2009
AUGUSTUS at MediGRID: Adaption of a bioinformatics application to grid computing for efficient genome analysis.
Future Gener. Comput. Syst., 2009
BMC Bioinform., 2009
2008
BMC Bioinform., 2008
Stability of multiple alignments and phylogenetic trees: an analysis of ABC-transporter proteins family.
Algorithms Mol. Biol., 2008
DIALIGN-TX: greedy and progressive approaches for segment-based multiple sequence alignment.
Algorithms Mol. Biol., 2008
Metabolite-based clustering and visualization of mass spectrometry data using one-dimensional self-organizing maps.
Algorithms Mol. Biol., 2008
2006
Nucleic Acids Res., 2006
TICO: a tool for postprocessing the predictions of prokaryotic translation initiation sites.
Nucleic Acids Res., 2006
Nucleic Acids Res., 2006
Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources.
BMC Bioinform., 2006
A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes.
BMC Bioinform., 2006
Algorithms Mol. Biol., 2006
2005
AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints.
Nucleic Acids Res., 2005
Nucleic Acids Res., 2005
BMC Bioinform., 2005
Bioinform., 2005
Bioinform., 2005
2004
Nucleic Acids Res., 2004
Nucleic Acids Res., 2004
Nucleic Acids Res., 2004
BMC Bioinform., 2004
Oligo kernels for datamining on biological sequences: a case study on prokaryotic translation initiation sites.
BMC Bioinform., 2004
Proceedings of the German Conference on Bioinformatics (GCB 2004), Bielefeld, 2004
2003
BMC Bioinform., 2003
Divide-and-conquer multiple alignment with segment-based constraints.
Proceedings of the European Conference on Computational Biology (ECCB 2003), 2003
2002
A simple and space-efficient fragment-chaining algorithm for alignment of DNA and protein sequences.
Appl. Math. Lett., 2002
Proceedings of the 1st IEEE Computer Society Bioinformatics Conference, 2002
2001
Gene prediction by comparative sequence analysis.
Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001
2000
Speeding Up the DIALIGN Multiple Alignment Program by Using the 'Greedy Alignment of BIOlogical Sequences LIBrary' (GABIOS-LIB).
Proceedings of the Computational Biology, 2000
1999
DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment.
Bioinform., 1999
Bioinform., 1999
1998
Proceedings of the 6th International Conference on Intelligent Systems for Molecular Biology (ISMB-98), Montréal, Québec, Canada, June 28, 1998
DIALIGN2: Improvement of the segment to segment approach to multiple sequence alignment.
Proceedings of the German Conference on Bioinformatics, 1998
1997
Dialign 1.0: Multiple alignment by Segment rather than by Position comparison.
Proceedings of the German Conference on Bioinformatics, 1997
1996