Hans-Werner Mewes

Orcid: 0000-0002-9713-6398

According to our database1, Hans-Werner Mewes authored at least 95 papers between 1989 and 2020.

Collaborative distances:

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

Online presence:

On csauthors.net:

Bibliography

2020
SmartPhase: Accurate and fast phasing of heterozygous variant pairs for genetic diagnosis of rare diseases.
PLoS Comput. Biol., 2020

2017
KNIME4NGS: a comprehensive toolbox for next generation sequencing analysis.
Bioinform., 2017

2014
SIMAP - the database of all-against-all protein sequence similarities and annotations with new interfaces and increased coverage.
Nucleic Acids Res., 2014

EXPANDS: expanding ploidy and allele frequency on nested subpopulations.
Bioinform., 2014

2011
FGDB: revisiting the genome annotation of the plant pathogen <i>Fusarium graminearum</i>.
Nucleic Acids Res., 2011

MIPS: curated databases and comprehensive secondary data resources in 2010.
Nucleic Acids Res., 2011

The sufficient minimal set of miRNA seed types.
Bioinform., 2011

2010
CORUM: the comprehensive resource of mammalian protein complexes - 2009.
Nucleic Acids Res., 2010

SIMAP - a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters.
Nucleic Acids Res., 2010

2009
PEDANT covers all complete RefSeq genomes.
Nucleic Acids Res., 2009

GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists.
Nucleic Acids Res., 2009

CRONOS: the cross-reference navigation server.
Bioinform., 2009

The DICS repository: module-assisted analysis of disease-related gene lists.
Bioinform., 2009

2008
OREST: the online resource for EST analysis.
Nucleic Acids Res., 2008

CORUM: the comprehensive resource of mammalian protein complexes.
Nucleic Acids Res., 2008

SIMAP - structuring the network of protein similarities.
Nucleic Acids Res., 2008

MIPS: analysis and annotation of genome information in 2007.
Nucleic Acids Res., 2008

ProfCom: a web tool for profiling the complex functionality of gene groups identified from high-throughput data.
Nucleic Acids Res., 2008

FunCat functional inference with belief propagation and feature integration.
Comput. Biol. Chem., 2008

Complex phylogenetic profiling reveals fundamental genotype-phenotype associations.
Comput. Biol. Chem., 2008

Beyond the "best" match: machine learning annotation of protein sequences by integration of different sources of information.
Bioinform., 2008

Consecutive KEGG Pathway Models for the Interpretation of High-throughput Genomics Data.
Proceedings of the German Conference on Bioinformatics, 2008

An environmental perspective on large-scale genome clustering based on metabolic capabilities.
Proceedings of the ECCB'08 Proceedings, 2008

2007
PEDANT genome database: 10 years online.
Nucleic Acids Res., 2007

Analysis of integrated biomolecular networks using a generic network analysis suite.
J. Integr. Bioinform., 2007

Revealing Comprehensive Genotype-Phenotype Associations through Logic Relationships.
Proceedings of the German Conference on Bioinformatics, 2007

2006
Correction: Spatiotemporal Expression Control Correlates with Intragenic Scaffold Matrix Attachment Regions (S/MARs) in <i>Arabidopsis thaliana</i>.
PLoS Comput. Biol., 2006

Spatiotemporal Expression Control Correlates with Intragenic Scaffold Matrix Attachment Regions (S/MARs) in <i>Arabidopsis thaliana</i>.
PLoS Comput. Biol., 2006

The Mouse Functional Genome Database (MfunGD): functional annotation of proteins in the light of their cellular context.
Nucleic Acids Res., 2006

SIMAP: the similarity matrix of proteins.
Nucleic Acids Res., 2006

MIPS: analysis and annotation of proteins from whole genomes in 2005.
Nucleic Acids Res., 2006

MPact: the MIPS protein interaction resource on yeast.
Nucleic Acids Res., 2006

FGDB: a comprehensive fungal genome resource on the plant pathogen <i>Fusarium graminearum</i>.
Nucleic Acids Res., 2006

Using Public Resource Computing and Systematic Pre-calculation for Large Scale Sequence Analysis.
Proceedings of the Distributed, 2006

2005
The PEDANT genome database in 2005.
Nucleic Acids Res., 2005

CYGD: the Comprehensive Yeast Genome Database.
Nucleic Acids Res., 2005

Gene selection from microarray data for cancer classification - a machine learning approach.
Comput. Biol. Chem., 2005

Exploiting scale-free information from expression data for cancer classification.
Comput. Biol. Chem., 2005

Super paramagnetic clustering of protein sequences.
BMC Bioinform., 2005

MIPS bacterial genomes functional annotation benchmark dataset.
Bioinform., 2005

The MIPS mammalian protein?Cprotein interaction database.
Bioinform., 2005

Support vector machines for separation of mixed plant?Cpathogen EST collections based on codon usage.
Bioinform., 2005

SIMAP - The similarity matrix of proteins.
Proceedings of the ECCB/JBI'05 Proceedings, Fourth European Conference on Computational Biology/Sixth Meeting of the Spanish Bioinformatics Network (Jornadas de BioInformática), Palacio de Congresos, Madrid, Spain, September 28, 2005

2004
MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource for plant genomics.
Nucleic Acids Res., 2004

MIPS: analysis and annotation of proteins from whole genomes.
Nucleic Acids Res., 2004

German Conference on Bioinformatics 2003 (GCB'03).
Bioinform., 2004

The Helmholtz Network for Bioinformatics: an integrative web portal for bioinformatics resources.
Bioinform., 2004

A web portal for classification of expression data using maximal margin linear programming.
Bioinform., 2004

Optimization models for cancer classification: extracting gene interaction information from microarray expression data.
Bioinform., 2004

2003
Sputnik: a database platform for comparative plant genomics.
Nucleic Acids Res., 2003

The PEDANT genome database.
Nucleic Acids Res., 2003

Conservation of protein-protein interactions among Ascomycota species.
Proceedings of the German Conference on Bioinformatics, 2003

Exploiting gene interaction information from microarray expression data for cancer classification.
Proceedings of the German Conference on Bioinformatics, 2003

2002
The Protein Information Resource: an integrated public resource of functional annotation of proteins.
Nucleic Acids Res., 2002

MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource based on the first complete plant genome.
Nucleic Acids Res., 2002

MIPS: a database for genomes and protein sequences.
Nucleic Acids Res., 2002

Exon discovery by genomic sequence alignment.
Bioinform., 2002

SNAPper: gene order predicts gene function.
Bioinform., 2002

2001
Protein Information Resource: a community resource for expert annotation of protein data.
Nucleic Acids Res., 2001

The HIB database of annotated UniGene clusters.
Bioinform., 2001

Functional and structural genomics using PEDANT.
Bioinform., 2001

2000
MITOP, the mitochondrial proteome database: 2000 update.
Nucleic Acids Res., 2000

MIPS: a database for genomes and protein sequences.
Nucleic Acids Res., 2000

The Protein Information Resource (PIR).
Nucleic Acids Res., 2000

Integrative Analysis of Protein Interaction Data.
Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology, 2000

1999
MITOP: database for mitochondria-related proteins, genes and diseases.
Nucleic Acids Res., 1999

MIPS: a database for genomes and protein sequences.
Nucleic Acids Res., 1999

The PIR-International Protein Sequence Database.
Nucleic Acids Res., 1999

Homology based gene prediction in Arabidopsis thaliana.
Proceedings of the German Conference on Bioinformatics, 1999

SESAM: Seed Extraction Sequence Analysis Method.
Proceedings of the German Conference on Bioinformatics, 1999

An Object-Oriented Data Model for the Dynamic Modelling of Metabolic Pathways.
Proceedings of the German Conference on Bioinformatics, 1999

Interpreting Clusters of Gene Expression Profiles in Terms of Metabolic Pathways.
Proceedings of the German Conference on Bioinformatics, 1999

A generic system for the management of sequence annotations.
Proceedings of the German Conference on Bioinformatics, 1999

1998
MIPS: a database for protein sequences and complete genomes.
Nucleic Acids Res., 1998

The PIR-International Protein Sequence Database.
Nucleic Acids Res., 1998

Comprehensive, comprehensible, distributed and intelligent databases: current status.
Bioinform., 1998

An Object Oriented Approach to Data Handling and Semiautomatic Processing of cDNA Clones.
Proceedings of the German Conference on Bioinformatics, 1998

Developing a groupware system for annotating Protein Sequences Using Object Oriented Technology.
Proceedings of the German Conference on Bioinformatics, 1998

Combining diverse evidence for gene recognition in completely sequenced bacterial genomes.
Proceedings of the German Conference on Bioinformatics, 1998

The MIPS Yeast Genome Database.
Proceedings of the German Conference on Bioinformatics, 1998

1997
MIPS: a database for protein sequences, homology data and yeast genome information.
Nucleic Acids Res., 1997

Migrating to an Object-Oriented Protein Sequence Database.
Proceedings of the German Conference on Bioinformatics, 1997

Custom Megabase Sequencing of a Small Eucaryotic Genome in Germany.
Proceedings of the German Conference on Bioinformatics, 1997

The MIPS Yeast Genome Database.
Proceedings of the German Conference on Bioinformatics, 1997

1996
The PIR-International Protein Sequence Database.
Nucleic Acids Res., 1996

Genomanalyse und WWW: Vom Klon zum Klick.
Informationstechnik Tech. Inform., 1996

A Top-Down Approach to Whole Genome Visualization.
Proceedings of the Fourth International Conference on Intelligent Systems for Molecular Biology, 1996

Yeast Genome Sequence Data on Display.
Proceedings of the German Conference on Bioinformatics, 1996

The Complete Sequence of the Yeast Genome.
Proceedings of the German Conference on Bioinformatics, 1996

Visualization and Analysis of the Complete Yeast Genome.
Proceedings of the Bioinformatics, German Conference on Bioinformatics, Leipzig, 1996

A Theoretical Model of Genome Redundancy.
Proceedings of the German Conference on Bioinformatics, 1996

1995
Genome Analysis: Pattern Search in Biological Macromolecules.
Proceedings of the Combinatorial Pattern Matching, 6th Annual Symposium, 1995

1994
A new concept of sequence data distribution on wide area networks.
Comput. Appl. Biosci., 1994

1993
The PIR-International databases.
Nucleic Acids Res., 1993

1989
Schnelle Identifizierung von Peptiden durch sensitive Bestimmung ihrer Aminosäurezusammensetzung und Zugriff auf Sequenzdatenbanken.
PhD thesis, 1989


  Loading...