Christopher Wilks

According to our database, Christopher Wilks authored at least 10 papers between 2005 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2021

Megadepth: efficient coverage quantification for BigWigs and BAMs.

Christopher Wilks, Omar Ahmed, Daniel N. Baker, David Zhang, Leonardo Collado-Torres, Ben Langmead

Bioinform., 2021

2019

Scaling read aligners to hundreds of threads on general-purpose processors.

Ben Langmead, Christopher Wilks, Valentin Antonescu, Rone Charles

Bioinform., 2019

2018

Snaptron: querying splicing patterns across tens of thousands of RNA-seq samples.

Christopher Wilks, Phani Gaddipati, Abhinav Nellore, Ben Langmead

Bioinform., 2018

2017

Rail-RNA: scalable analysis of RNA-seq splicing and coverage.

Abhinav Nellore, Leonardo Collado-Torres, Andrew E. Jaffe, José Alquicira-Hernández, Christopher Wilks, Jacob Pritt, James Morton, Jeffrey T. Leek, Ben Langmead

Bioinform., 2017

2016

Rail-dbGaP: analyzing dbGaP-protected data in the cloud with Amazon Elastic MapReduce.

Abhinav Nellore, Christopher Wilks, Kasper D. Hansen, Jeffrey T. Leek, Ben Langmead

Bioinform., 2016

2014

The Cancer Genomics Hub (CGHub): overcoming cancer through the power of torrential data.

Christopher Wilks, Melissa S. Cline, Erich Weiler, Mark Diekhans, Brian Craft, Christy Martin, Daniel Murphy, Howdy Pierce, John Black, Donavan Nelson, Brian Litzinger, Thomas Hatton, Lori Maltbie, Michael Ainsworth, Patrick Allen, Linda Rosewood, Elizabeth Mitchell, Bradley Smith, Jim Warner, John Groboske, Haifang Telc, Daniel Wilson, Brian Sanford, Hannes Schmidt, David Haussler, Daniel Maltbie

Database J. Biol. Databases Curation, 2014

2013

The UCSC Cancer Genomics Browser: update 2013.

Mary Goldman, Brian Craft, Teresa Swatloski, Kyle Ellrott, Melissa S. Cline, Mark Diekhans, Singer Ma, Chris Wilks, Joshua M. Stuart, David Haussler, Jingchun Zhu

Nucleic Acids Res., 2013

2012

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools.

Philippe Lamesch, Tanya Z. Berardini, Donghui Li, David Swarbreck, Christopher Wilks, Rajkumar Sasidharan, Robert J. Muller, Kate Dreher, Debbie L. Alexander, Margarita Garcia-Hernandez, Athikkattuvalasu S. Karthikeyan, Cynthia H. Lee, William D. Nelson, Larry Ploetz, Shanker Singh, April Wensel, Eva Huala

Nucleic Acids Res., 2012

2008

The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

David Swarbreck, Christopher Wilks, Philippe Lamesch, Tanya Z. Berardini, Margarita Garcia-Hernandez, Hartmut Foerster, Donghui Li, Tom Meyer, Robert J. Muller, Larry Ploetz, Amie Radenbaugh, Shanker Singh, Vanessa Swing, Christophe Tissier, Peifen Zhang, Eva Huala

Nucleic Acids Res., 2008

2005

A Fast Shotgun Assembly Heuristic.

Christopher Wilks, Sami Khuri

Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005