Integration of anatomy ontology data with protein-protein interaction networks improves the candidate gene prediction accuracy for anatomical entities.

[BibT_eX]

[DOI]

Pasan C. Fernando

Paula M. Mabee

Erliang Zeng

BMC Bioinform., 2020

2017

A generic bioinformatics pipeline to integrate large-scale trait data with large phylogenies.

[BibT_eX]

[DOI]

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2015

A computational framework for integrative analysis of large microbial genomics data.

[BibT_eX]

[DOI]

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

De novo genome assembly tool comparison for highly heterozygous species Vitis vinifera cv. Sultanina.

[BibT_eX]

[DOI]

Sagar Patel

Padmapriya Swaminathan

Anne Fennell

Erliang Zeng

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014

Mapping genomic features to functional traits through microbial whole genome sequences.

[BibT_eX]

[DOI]

Int. J. Bioinform. Res. Appl., 2014

2013

Predicting bacterial functional traits from whole genome sequences using random forest.

[BibT_eX]

[DOI]

Proceedings of the IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, 2013

2012

Combining Gene Expression Profiles and Protein-Protein Interactions for Identifying Functional Modules.

[BibT_eX]

[DOI]

Proceedings of the 11th International Conference on Machine Learning and Applications, 2012

A machine learning framework for trait based genomics.

[BibT_eX]

[DOI]

Proceedings of the IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, 2012

2010

Clustering Genes Using Heterogeneous Data Sources.

[BibT_eX]

[DOI]

Int. J. Knowl. Discov. Bioinform., 2010

A two-stage machine learning approach for pathway analysis.

[BibT_eX]

[DOI]

Wei Zhang

Scott J. Emrich

Erliang Zeng

Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

2009

Weighted Consensus Clustering for Identifying Functional Modules in Protein-Protein Interaction Networks.

[BibT_eX]

[DOI]

Proceedings of the International Conference on Machine Learning and Applications, 2009

2008

A Functional Network of Yeast Genes Using Gene Ontology Information.

[BibT_eX]

[DOI]

Proceedings of the 2008 IEEE International Conference on Bioinformatics and Biomedicine, 2008

2007

Enhancing Motif Refinement by Incorporating Comparative Genomics Data.

[BibT_eX]

[DOI]

Erliang Zeng

Giri Narasimhan

Proceedings of the Bioinformatics Research and Applications, Third International Symposium, 2007

On the Effectiveness of Constraints Sets in Clustering Genes.

[BibT_eX]

[DOI]

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

2005

A Knowledge-Driven Method to Evaluate Multi-source Clustering.

[BibT_eX]

[DOI]

Proceedings of the Parallel and Distributed Processing and Applications, 2005

Clustering Genes Using Gene Expression and Text Literature Data.

[BibT_eX]

[DOI]

Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, 2005

Querying a Database of regulatory Elements.

[BibT_eX]

[DOI]

Proceedings of the Advances in Bioinformatics and Its Applications, 2005

Erliang Zeng

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