Paula M. Mabee

Orcid: 0000-0002-8455-3213

According to our database1, Paula M. Mabee authored at least 20 papers between 2008 and 2023.

Collaborative distances:

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

Online presence:

On csauthors.net:

Bibliography

2023
Discovering Novel Biological Traits From Images Using Phylogeny-Guided Neural Networks.
Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2023

2020
Integration of anatomy ontology data with protein-protein interaction networks improves the candidate gene prediction accuracy for anatomical entities.
BMC Bioinform., 2020

Biodiversity Image Quality Metadata Augments Convolutional Neural Network Classification of Fish Species.
Proceedings of the Metadata and Semantic Research - 14th International Conference, 2020

2019
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program.
, , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , ,
Nat., 2019

2018
Phenoscape: Semantic analysis of organismal traits and genes yields insights in evolutionary biology.
Proceedings of the Application of Semantic Technology in Biodiversity Science, 2018

Annotation of phenotypes using ontologies: a gold standard for the training and evaluation of natural language processing systems.
Database J. Biol. Databases Curation, 2018

Reasoning over Anatomical Homology in the Phenoscape KB.
Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

2017
A generic bioinformatics pipeline to integrate large-scale trait data with large phylogenies.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2015
Moving the mountain: analysis of the effort required to transform comparative anatomy into computable anatomy.
Database J. Biol. Databases Curation, 2015

CharaParser+EQ: Performance evaluation without gold standard.
Proceedings of the Information Science with Impact: Research in and for the Community, 2015

2014
Presence-absence reasoning for evolutionary phenotypes.
CoRR, 2014

Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon.
J. Biomed. Semant., 2014

Nose to tail, roots to shoots: spatial descriptors for phenotypic diversity in the Biological Spatial Ontology.
J. Biomed. Semant., 2014

Annotation of phenotypic diversity: decoupling data curation and ontology curation using Phenex.
J. Biomed. Semant., 2014

2013
The vertebrate taxonomy ontology: a framework for reasoning across model organism and species phenotypes.
J. Biomed. Semant., 2013

An overview of the BioCreative 2012 Workshop Track III: interactive text mining task.
Database J. Biol. Databases Curation, 2013

2011
Similarity Between Semantic Description Sets: Addressing Needs Beyond Data Integration.
Proceedings of the First International Workshop on Linked Science 2011, 2011

Phenoscape: Use Cases and Anatomy Ontology Requirements for Linking Evolutionary and Model Organism Phenotypes.
Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

Employing Reasoning within the Phenoscape Knowledgebase.
Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

2008
CARO - The Common Anatomy Reference Ontology.
Proceedings of the Anatomy Ontologies for Bioinformatics, Principles and Practice, 2008


  Loading...