François Képès

According to our database, François Képès authored at least 18 papers between 2003 and 2016.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2016

GREAT: a web portal for Genome Regulatory Architecture Tools.

Costas Bouyioukos, François Bucchini, Mohamed Elati, François Képès

Nucleic Acids Res., 2016

Analysis tools for the interplay between genome layout and regulation.

Costas Bouyioukos, Mohamed Elati, François Képès

BMC Bioinform., 2016

2013

Parallel stepwise stochastic simulation: harnessing GPUs to explore possible futures states of a chromosome folding model thanks to the possible futures algorithm (PFA).

Jonathan Passerat-Palmbach, Jonathan Caux, Yannick Le Pennec, Romain Reuillon, Ivan Junier, François Képès, David R. C. Hill

Proceedings of the SIGSIM Principles of Advanced Discrete Simulation, 2013

2011

Computing with bacterial constituents, cells and populations: from bioputing to bactoputing.

Vic Norris, Abdallah Zemirline, Patrick Amar, Jean Nicolas Audinot, Pascal Ballet, Eshel Ben-Jacob, Gilles Bernot, Guillaume Beslon, Armelle Cabin, Eric Fanchon, Jean-Louis Giavitto, Nicolas Glade, Patrick Greussay, Yohann Grondin, James A. Foster, Guillaume Hutzler, Jürgen Jost, François Képès, Olivier Michel, Franck Molina, Jacqueline Signorini, Pasquale Stano, Alain R. Thierry

Theory Biosci., 2011

Introduction to special issue ECCS'09 in Theory in Biosciences.

Markus Kirkilionis, François Képès

Theory Biosci., 2011

Boosting Binding Sites Prediction Using Gene's Positions.

Mohamed Elati, Rim Fekih, Rémy Nicolle, Ivan Junier, Joan Hérisson, François Képès

Proceedings of the Algorithms in Bioinformatics - 11th International Workshop, 2011

2010

Spatial and Topological Organization of DNA Chains Induced by Gene Co-localization.

Ivan Junier, Olivier C. Martin, François Képès

PLoS Comput. Biol., 2010

Periodic pattern detection in sparse boolean sequences.

Ivan Junier, Joan Hérisson, François Képès

Algorithms Mol. Biol., 2010

Challenges in experimental data integration within genome-scale metabolic models.

Pierre-Yves Bourguignon, Areejit Samal, François Képès, Jürgen Jost, Olivier C. Martin

Algorithms Mol. Biol., 2010

2009

Spatial Information and Boolean Genetic Regulatory Networks.

Matthieu Manceny, Marc Aiguier, Pascale Le Gall, Joan Hérisson, Ivan Junier, François Képès

Proceedings of the Bioinformatics and Computational Biology, 2009

2008

Topology-based abstraction of complex biological systems: application to the Golgi apparatus.

Mathieu Poudret, Agnès Arnould, Jean-Paul Comet, Pascale Le Gall, Philippe Meseure, François Képès

Theory Biosci., 2008

2007

Chronique : Le programme d'épigénomique.

Gilles Bernot, François Képès

Tech. Sci. Informatiques, 2007

From MIN model to ordinary differential equations.

Anastasia Yartseva, Raymond R. Devillers, Hanna Klaudel, François Képès

J. Integr. Bioinform., 2007

Incremental and unifying modelling formalism for biological interaction networks.

Anastasia Yartseva, Hanna Klaudel, Raymond R. Devillers, François Képès

BMC Bioinform., 2007

2006

Property-Driven Statistics of Biological Networks.

Pierre-Yves Bourguignon, Vincent Danos, François Képès, Serge Smidtas, Vincent Schächter

Trans. Comp. Sys. Biology, 2006

Yeast Naked DNA Spatial Organization Predisposes to Transcriptional Regulation.

Oriane Matte-Tailliez, Joan Hérisson, Nicolas Férey, Olivier Magneau, Pierre-Emmanuel Gros, François Képès, Rachid Gherbi

Proceedings of the Computational Science and Its Applications, 2006

2004

Transcription/replication collisions cause bacterial transcription units to be longer on the leading strand of replication.

Nicolas Omont, François Képès

Bioinform., 2004

2003

Codon adaptation index as a measure of dominating codon bias.

Alessandra Carbone, Andrei Yu. Zinovyev, François Képès

Bioinform., 2003