James A. Foster

According to our database1, James A. Foster
  • authored at least 56 papers between 1992 and 2017.
  • has a "Dijkstra number"2 of four.

Timeline

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Bibliography

2017
Taking "biology" just seriously enough: Commentary on "On the Mapping of Genotype to Phenotype in Evolutionary Algorithms" by Peter A. Whigham, Grant Dick, and James Maclaurin.
Genetic Programming and Evolvable Machines, 2017

SeqyClean: A Pipeline for High-throughput Sequence Data Preprocessing.
Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

2016
Defining and simulating open-ended novelty: requirements, guidelines, and challenges.
Theory in Biosciences, 2016

Computational Approaches to Study Microbes and Microbiomes.
Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016

2015
MetAmp: combining amplicon data from multiple markers for OTU analysis.
Bioinformatics, 2015

Seed: a user-friendly tool for exploring and visualizing microbial community data.
Bioinformatics, 2015

Machine learning classifiers provide insight into the relationship between microbial communities and bacterial vaginosis.
BioData Mining, 2015

2014
Building the Next Generation of Quantitative Biologists.
Proceedings of the Biocomputing 2014: Proceedings of the Pacific Symposium, 2014

Applying machine learning techniques in detecting Bacterial Vaginosis.
Proceedings of the 2014 International Conference on Machine Learning and Cybernetics, 2014

GA-based selection of vaginal microbiome features associated with bacterial vaginosis.
Proceedings of the Genetic and Evolutionary Computation Conference, 2014

Detecting bacterial vaginosis using machine learning.
Proceedings of the 2014 ACM Southeast Regional Conference, Kennesaw, GA, USA, March 28, 2014

2013
Introduction to special section: Best of EuroGP/EvoBio.
Genetic Programming and Evolvable Machines, 2013

decisivatoR: an R infrastructure package that addresses the problem of phylogenetic decisiveness.
Proceedings of the ACM Conference on Bioinformatics, 2013

2012
Guest editorial: special issue on selected papers from the European conference on genetic programming.
Genetic Programming and Evolvable Machines, 2012

mcaGUI: microbial community analysis R-Graphical User Interface (GUI).
Bioinformatics, 2012

Estimating population diversity with CatchAll.
Bioinformatics, 2012

Measuring the microbiome: perspectives on advances in DNA-based techniques for exploring microbial life.
Briefings in Bioinformatics, 2012

Session introduction.
Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012

Estimating Population Diversity with Unreliable Low Frequency Counts.
Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012

2011
Computing with bacterial constituents, cells and populations: from bioputing to bactoputing.
Theory in Biosciences, 2011

OTUbase: an R infrastructure package for operational taxonomic unit data.
Bioinformatics, 2011

Session Introduction.
Proceedings of the Biocomputing 2011: Proceedings of the Pacific Symposium, 2011

2006
Clearcut: a fast implementation of relaxed neighbor joining.
Bioinformatics, 2006

Estimating the destructiveness of crossover on binary tree representations.
Proceedings of the Genetic and Evolutionary Computation Conference, 2006

2005
Introduction.
Genetic Programming and Evolvable Machines, 2005

2004
Multiple Sequence Alignment with Evolutionary Computation.
Genetic Programming and Evolvable Machines, 2004

Editorial Introduction.
Genetic Programming and Evolvable Machines, 2004

Evolving Better Multiple Sequence Alignments.
Proceedings of the Genetic and Evolutionary Computation, 2004

Co-evolving Faults to Improve the Fault Tolerance of Sorting Networks.
Proceedings of the Genetic Programming, 7th European Conference, 2004

Improving the Survivability of a Simple Evolved Circuit through Co-evolution.
Proceedings of the 6th NASA / DoD Workshop on Evolvable Hardware (EH 2004), 2004

2003
Behavioral Diversity and a Probabilistically Optimal GP Ensemble.
Genetic Programming and Evolvable Machines, 2003

Evolving Consensus Sequence for Multiple Sequence Alignment with a Genetic Algorithm.
Proceedings of the Genetic and Evolutionary Computation, 2003

Inherent Fault Tolerance in Evolved Sorting Networks.
Proceedings of the Genetic and Evolutionary Computation, 2003

2002
A Genetic Algorithm-specific Test Of Random Generator Quality.
Proceedings of the GECCO 2002: Proceedings of the Genetic and Evolutionary Computation Conference, 2002

How Random Generator Quality Impacts GA Performance.
Proceedings of the GECCO 2002: Proceedings of the Genetic and Evolutionary Computation Conference, 2002

Abstention Reduces Errors - decision Abstaining N-version Genetic Programming.
Proceedings of the GECCO 2002: Proceedings of the Genetic and Evolutionary Computation Conference, 2002

N-Version Genetic Programming via Fault Masking.
Proceedings of the Genetic Programming, 5th European Conference, 2002

MiCA: Web-Based Computational Tools for the Analysis of Microbial Community Structure and Compisition Based on T-RFLP of 16S rRNA Gene.
Proceedings of the 1st IEEE Computer Society Bioinformatics Conference, 2002

Electronic Polymerase Chain Reaction (EPCR) Search Algorithm.
Proceedings of the 1st IEEE Computer Society Bioinformatics Conference, 2002

2001
Review: Discipulus: A Commercial Genetic Programming System.
Genetic Programming and Evolvable Machines, 2001

Computational Complexity, Genetic Programming, and Implications.
Proceedings of the Genetic Programming, 4th European Conference, 2001

2000
The 2-Pebbling Property and a Conjecture of Graham's.
Graphs and Combinatorics, 2000

Quantum Genetic Algorithms.
Proceedings of the Genetic and Evolutionary Computation Conference (GECCO '00), 2000

GA Hard Problems.
Proceedings of the Genetic and Evolutionary Computation Conference (GECCO '00), 2000

Evolving Molecules for Drug Design Using Genetic Algorithms via Molecular Trees.
Proceedings of the Genetic and Evolutionary Computation Conference (GECCO '00), 2000

Special Purpose Image Convolution with Evolvable Hardware.
Proceedings of the Real-World Applications of Evolutionary Computing, 2000

Size versus Robustness in Evolved Sorting Networks: Is Bigger Better?
Proceedings of the 2nd NASA / DoD Workshop on Evolvable Hardware (EH 2000), 2000

The Test Vector Problem and Limitations to Evolving Digital Circuits.
Proceedings of the 2nd NASA / DoD Workshop on Evolvable Hardware (EH 2000), 2000

1999
Towards Byte Code Genetic Programming.
Proceedings of the Genetic and Evolutionary Computation Conference (GECCO 1999), 1999

Representation and Robustness for Evolved Sorting Networks.
Proceedings of the 1st NASA / DoD Workshop on Evolvable Hardware (EH '99), 1999

1998
Effects of Code Growth and Parsimony Pressure on Populations in Genetic Programming.
Evolutionary Computation, 1998

1997
Genetic Algorithm Hardness Measures Applied to the Maximum Clique Problem.
Proceedings of the 7th International Conference on Genetic Algorithms, 1997

The Quality of Pseudo-Random Number Generations and Simple Genetic Algorithm Performance.
Proceedings of the 7th International Conference on Genetic Algorithms, 1997

1995
(In)Formal Methods: Teaching Program Derivation Via the Moore Method.
Computer Science Education, 1995

1993
The Generic Oracle Hypothesis is False.
Inf. Process. Lett., 1993

1992
The Generic Oracle Hypothesis Fails.
Proceedings of the Computing and Information, 1992


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