Guillaume Bret

According to our database, Guillaume Bret authored at least 14 papers between 2006 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2026

Assessing Boltz-2 Performance for the Binding Classification of Docking Hits.

Guillaume Bret, François Sindt, Didier Rognan

J. Chem. Inf. Model., 2026

2025

On the Difficulty to Rescore Hits from Ultralarge Docking Screens.

François Sindt, Guillaume Bret, Didier Rognan

J. Chem. Inf. Model., 2025

2024

Benchmarking AlphaFold-Generated Structures of Chemokine-Chemokine Receptor Complexes.

Lauri Urvas, Luca Chiesa, Guillaume Bret, Célien Jacquemard, Esther Kellenberger

J. Chem. Inf. Model., 2024

CACHE Challenge #1: Targeting the WDR Domain of LRRK2, A Parkinson's Disease Associated Protein.

Fengling Li, Suzanne Ackloo, Cheryl H. Arrowsmith, Fuqiang Ban, Christopher J. Barden, Hartmut Beck, Jan Beránek, Francois Berenger, Albina Bolotokova, Guillaume Bret, Marko Breznik, Emanuele Carosati, Irene Chau, Yu Chen, Artem Cherkasov, Dennis Della Corte, Katrin Denzinger, Aiping Dong, Sorin Draga, Ian Dunn, Kristina Edfeldt, Aled M. Edwards, Merveille K. I. Eguida, Paul Eisenhuth, Lukas Friedrich, Alexander Fuerll, Spencer S. Gardiner, Francesco Gentile, Pegah Ghiabi, Elisa Gibson, Marta Glavatskikh, Christoph Gorgulla, Judith Guenther, Anders Gunnarsson, Filipp Gusev, Evgeny Gutkin, Levon Halabelian, Rachel J. Harding, Alexander Hillisch, Laurent Hoffer, Anders Hogner, Scott Houliston, John J. Irwin, Olexandr Isayev, Aleksandra Ivanova, Célien Jacquemard, Austin J. Jarrett, Jan H. Jensen, Dmitri Kireev, Julian Kleber, S. Benjamin Koby, David Koes, Ashutosh Kumar, Maria G. Kurnikova, Alina Kutlushina, Uta F. Lessel, Fabian Liessmann, Sijie Liu, Wei Lu, Jens Meiler, Akhila Mettu, Guzel Minibaeva, Rocco Moretti, Connor J. Morris, Chamali Narangoda, Theresa Noonan, Leon Obendorf, Szymon Pach, Amit Pandit, Sumera Perveen, Gennady Poda, Pavel G. Polishchuk, Kristina Puls, Vera Pütter, Didier Rognan, Dylan Roskams-Edris, Christina E. M. Schindler, François Sindt, Vojtech Spiwok, Casper Steinmann, Rick L. Stevens, Valerij Talagayev, Damon Tingey, Oanh Vu, W. Patrick Walters, Xiaowen Wang, Zhenyu Wang, Gerhard Wolber, Clemens Alexander Wolf, Lars Wortmann, Hong Zeng, Carlos A. Zepeda, Kam Y. J. Zhang, Jixian Zhang, Shuangjia Zheng, Matthieu Schapira

J. Chem. Inf. Model., 2024

Subpocket Similarity-Based Hit Identification for Challenging Targets: Application to the WDR Domain of LRRK2.

Merveille K. I. Eguida, Guillaume Bret, François Sindt, Fengling Li, Irene Chau, Suzanne Ackloo, Cheryl H. Arrowsmith, Albina Bolotokova, Pegah Ghiabi, Elisa Gibson, Levon Halabelian, Scott Houliston, Rachel J. Harding, Ashley Hutchinson, Peter Loppnau, Sumera Perveen, Almagul Seitova, Hong Zeng, Matthieu Schapira, Didier Rognan

J. Chem. Inf. Model., 2024

2022

Comparing transmembrane protein structures with ATOLL.

Célien Jacquemard, Guillaume Bret, Thomas Grutter, Esther Kellenberger

Bioinform., 2022

2021

True Accuracy of Fast Scoring Functions to Predict High-Throughput Screening Data from Docking Poses: The Simpler the Better.

Viet-Khoa Tran-Nguyen, Guillaume Bret, Didier Rognan

J. Chem. Inf. Model., 2021

2019

All in One: Cavity Detection, Druggability Estimate, Cavity-Based Pharmacophore Perception, and Virtual Screening.

Viet-Khoa Tran-Nguyen, Franck Da Silva, Guillaume Bret, Didier Rognan

J. Chem. Inf. Model., 2019

2018

Ranking docking poses by graph matching of protein-ligand interactions: lessons learned from the D3R Grand Challenge 2.

Priscila da Silva Figueiredo Celestino Gomes, Franck Da Silva, Guillaume Bret, Didier Rognan

J. Comput. Aided Mol. Des., 2018

2016

Docking pose selection by interaction pattern graph similarity: application to the D3R grand challenge 2015.

Inna Slynko, Franck Da Silva, Guillaume Bret, Didier Rognan

J. Comput. Aided Mol. Des., 2016

2015

sc-PDB: a 3D-database of ligandable binding sites - 10 years on.

Jérémy Desaphy, Guillaume Bret, Didier Rognan, Esther Kellenberger

Nucleic Acids Res., 2015

IChemPIC: A Random Forest Classifier of Biological and Crystallographic Protein-Protein Interfaces.

Franck Da Silva, Jérémy Desaphy, Guillaume Bret, Didier Rognan

J. Chem. Inf. Model., 2015

2006

Assessing the Scaffold Diversity of Screening Libraries.

Mireille Krier, Guillaume Bret, Didier Rognan

J. Chem. Inf. Model., 2006

sc-PDB: an Annotated Database of Druggable Binding Sites from the Protein Data Bank.

Esther Kellenberger, Pascal Muller, Claire Schalon, Guillaume Bret, Nicolas Foata, Didier Rognan

J. Chem. Inf. Model., 2006