Francois Berenger

According to our database, Francois Berenger authored at least 15 papers between 2010 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

3D-Sensitive Encoding of Pharmacophore Features.

Francois Berenger, Koji Tsuda

J. Chem. Inf. Model., April, 2023

2021

Lean-Docking: Exploiting Ligands' Predicted Docking Scores to Accelerate Molecular Docking.

Francois Berenger, Ashutosh Kumar, Kam Y. J. Zhang, Yoshihiro Yamanishi

J. Chem. Inf. Model., 2021

Molecular generation by Fast Assembly of (Deep)SMILES fragments.

Francois Berenger, Koji Tsuda

J. Cheminformatics, 2021

2020

Ranking Molecules with Vanishing Kernels and a Single Parameter: Active Applicability Domain Included.

Francois Berenger, Yoshihiro Yamanishi

J. Chem. Inf. Model., 2020

2019

A Distance-Based Boolean Applicability Domain for Classification of High Throughput Screening Data.

Francois Berenger, Yoshihiro Yamanishi

J. Chem. Inf. Model., 2019

Chemoinformatics and structural bioinformatics in OCaml.

Francois Berenger, Kam Y. J. Zhang, Yoshihiro Yamanishi

J. Cheminformatics, 2019

Predicting drug-induced transcriptome responses of a wide range of human cell lines by a novel tensor-train decomposition algorithm.

Michio Iwata, Longhao Yuan, Qibin Zhao, Yasuo Tabei, Francois Berenger, Ryusuke Sawada, Sayaka Akiyoshi, Momoko Hamano, Yoshihiro Yamanishi

Bioinform., 2019

2017

Consensus queries in ligand-based virtual screening experiments.

Francois Berenger, Oanh Vu, Jens Meiler

J. Cheminformatics, 2017

Fragger: a protein fragment picker for structural queries.

Francois Berenger, David Simoncini, Arnout R. D. Voet, Rojan Shrestha, Kam Y. J. Zhang

F1000Research, 2017

Semantic-directed clumping of disjunctive abstract states.

Huisong Li, Francois Berenger, Bor-Yuh Evan Chang, Xavier Rival

Proceedings of the 44th ACM SIGPLAN Symposium on Principles of Programming Languages, 2017

2014

A rotation-translation invariant molecular descriptor of partial charges and its use in ligand-based virtual screening.

Francois Berenger, Arnout R. D. Voet, Xiao Yin Lee, Kam Y. J. Zhang

J. Cheminformatics, 2014

Combining in silico and in cerebro approaches for virtual screening and pose prediction in SAMPL4.

Arnout R. D. Voet, Ashutosh Kumar, Francois Berenger, Kam Y. J. Zhang

J. Comput. Aided Mol. Des., 2014

2012

Durandal: Fast exact clustering of protein decoys.

Francois Berenger, Rojan Shrestha, Yong Zhou, David Simoncini, Kam Y. J. Zhang

J. Comput. Chem., 2012

2011

Entropy-accelerated exact clustering of protein decoys.

Francois Berenger, Yong Zhou, Rojan Shrestha, Kam Y. J. Zhang

Bioinform., 2011

2010

PAR: a PARallel and distributed job crusher.

Francois Berenger, Camille Coti, Kam Y. J. Zhang

Bioinform., 2010