Hong-Dong Li

Orcid: 0000-0003-3438-739X

According to our database¹, Hong-Dong Li authored at least 31 papers between 2010 and 2024.

Collaborative distances:

Dijkstra number² of four.
Erdős number³ of three.

Timeline

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PhD thesis

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On csauthors.net:

Bibliography

2024

Graph-Based Fusion of Imaging, Genetic and Clinical Data for Degenerative Disease Diagnosis.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2024

2023

IsoFrog: a reversible jump Markov Chain Monte Carlo feature selection-based method for predicting isoform functions.

[BibT_eX]

[DOI]

Bioinform., September, 2023

DeepRetention: A Deep Learning Approach for Intron Retention Detection.

[BibT_eX]

[DOI]

Big Data Min. Anal., June, 2023

Computational approaches for detecting disease-associated alternative splicing events.

[BibT_eX]

[DOI]

Briefings Bioinform., May, 2023

IsoCell: An Approach to Enhance Single Cell Clustering by Integrating Isoform-Level Expression Through Orthogonal Projection.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

A Comparison of Topologically Associating Domain Callers Based on Hi-C Data.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

A Gene Set-Integrated Approach for Predicting Disease-Associated Genes.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

CellBRF: a feature selection method for single-cell clustering using cell balance and random forest.

[BibT_eX]

[DOI]

Bioinform., 2023

2022

GTFtools: a software package for analyzing various features of gene models.

[BibT_eX]

[DOI]

Hong-Dong Li

Cui-Xiang Lin

Jiantao Zheng

Bioinform., October, 2022

TissueNexus: a database of human tissue functional gene networks built with a large compendium of curated RNA-seq data.

[BibT_eX]

[DOI]

Nucleic Acids Res., 2022

AlzCode: a platform for multiview analysis of genes related to Alzheimer's disease.

[BibT_eX]

[DOI]

Bioinform., 2022

A comparison of computational approaches for intron retention detection.

[BibT_eX]

[DOI]

Big Data Min. Anal., 2022

An integrated brain-specific network identifies genes associated with neuropathologic and clinical traits of Alzheimer's disease.

[BibT_eX]

[DOI]

Briefings Bioinform., 2022

An Alzheimer's disease gene prediction method based on ensemble of genome-wide association study summary statistics.

[BibT_eX]

[DOI]

Jia-Hao Song

Cui-Xiang Lin

Hong-Dong Li

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

KL-RF: Predicting disease-gene associations with model fusion.

[BibT_eX]

[DOI]

Hai Liu

Hong-Dong Li

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

A Gene Rank Based Approach for Single Cell Similarity Assessment and Clustering.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2021

IsoResolve: predicting splice isoform functions by integrating gene and isoform-level features with domain adaptation.

[BibT_eX]

[DOI]

Bioinform., 2021

Identifying the tissues-of-origin of circulating cell-free DNAs is a promising way in noninvasive diagnostics.

[BibT_eX]

[DOI]

Briefings Bioinform., 2021

REBET: a method to determine the number of cell clusters based on batch effect removal.

[BibT_eX]

[DOI]

Briefings Bioinform., 2021

GraphIsoFun: a graph neural network based approach for splice isoform function prediction.

[BibT_eX]

[DOI]

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

Improving the Prediction of Disease-associated Genes by Integrating Annotated Gene Sets.

[BibT_eX]

[DOI]

Chao Deng

Cui-Xiang Lin

Hong-Dong Li

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2020

ClusterMine: A knowledge-integrated clustering approach based on expression profiles of gene sets.

[BibT_eX]

[DOI]

J. Bioinform. Comput. Biol., 2020

A network enhancement-based method for clustering of single cell RNA-seq data.

[BibT_eX]

[DOI]

Int. J. Data Min. Bioinform., 2020

Identification of Disease-Associated Genes Based on Differential Intron Retention.

[BibT_eX]

[DOI]

Zhenpeng Wu

Jiantao Zheng

Hong-Dong Li

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

Joint Learning of Primary and Secondary Labels based on Multi-scale Representation for Alzheimer's Disease Diagnosis.

[BibT_eX]

[DOI]

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019

BaiHui: cross-species brain-specific network built with hundreds of hand-curated datasets.

[BibT_eX]

[DOI]

Bioinform., 2019

A Global Similarity Learning for Clustering of Single-Cell RNA-Seq Data.

[BibT_eX]

[DOI]

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2018

BioRank: A Similarity Assessment Method for Single Cell Clustering.

[BibT_eX]

[DOI]

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017

An interpretable model for predicting side effects of analgesics for osteoarthritis.

[BibT_eX]

[DOI]

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2011

Recipe for Uncovering Predictive Genes Using Support Vector Machines Based on Model Population Analysis.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

2010

A new strategy of outlier detection for QSAR/QSPR.

[BibT_eX]

[DOI]

J. Comput. Chem., 2010

Hong-Dong Li

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On csauthors.net:

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