Hui Lu
Orcid: 0000-0001-8347-0830Affiliations:
- University of Illinois at Chicago, Department of Bioengineering, IL, USA
- Shanghai Jiaotong University, Department of Bioinformatics and Biostatistics, China
- Shanghai Engineering Research Center for Big Data in Pediatric Precision Medicine, China
According to our database1,
Hui Lu
authored at least 34 papers
between 2005 and 2024.
Collaborative distances:
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Bibliography
2024
Transformer with convolution and graph-node co-embedding: An accurate and interpretable vision backbone for predicting gene expressions from local histopathological image.
Medical Image Anal., January, 2024
2023
Appl. Intell., December, 2023
diseaseGPS: auxiliary diagnostic system for genetic disorders based on genotype and phenotype.
Bioinform., September, 2023
HBV-infected hepatocellular carcinoma can be robustly classified into three clinically relevant subgroups by a novel analytical protocol.
Briefings Bioinform., March, 2023
CARE as a wearable derived feature linking circadian amplitude to human cognitive functions.
npj Digit. Medicine, 2023
Comprehensive Analysis of Ubiquitously Expressed Genes in Humans from A Data-driven Perspective.
Genom. Proteom. Bioinform., 2023
2022
scBERT as a large-scale pretrained deep language model for cell type annotation of single-cell RNA-seq data.
Nat. Mac. Intell., October, 2022
Comput. Biol. Medicine, 2022
MZINBVA: variational approximation for multilevel zero-inflated negative-binomial models for association analysis in microbiome surveys.
Briefings Bioinform., 2022
2021
<i>RePhine</i>: An Integrative Method for Identification of Drug Response-related Transcriptional Regulators.
Genom. Proteom. Bioinform., 2021
2020
Predicting viral exposure response from modeling the changes of co-expression networks using time series gene expression data.
BMC Bioinform., 2020
2019
Residue-Specific Force Field Improving the Sample of Intrinsically Disordered Proteins and Folded Proteins.
J. Chem. Inf. Model., 2019
Identifying and characterizing the effects of calendar and environmental conditions on pediatric admissions in Shanghai.
J. Big Data, 2019
CellSim: a novel software to calculate cell similarity and identify their co-regulation networks.
BMC Bioinform., 2019
2018
A new method to measure the semantic similarity from query phenotypic abnormalities to diseases based on the human phenotype ontology.
BMC Bioinform., 2018
A novel joint analysis framework improves identification of differentially expressed genes in cross disease transcriptomic analysis.
BioData Min., 2018
2017
Prediction of human QT prolongation liability based on pre-clinical RNA expression profiles.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017
2016
Gut microbiota community adaption during young children fecal microbiota transplantation by 16s rDNA sequencing.
Neurocomputing, 2016
BMC Syst. Biol., 2016
High-dimensional omics data analysis using a variable screening protocol with prior knowledge integration (SKI).
BMC Syst. Biol., 2016
Implementation of a city-wide Health Information Exchange solution in the largest metropolitan region in China.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016
A novel scoring estimator to screening for oncogenic chimeric transcripts in cancer transcriptome sequencing.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016
2015
Bioinform., 2015
2014
Predicting essential genes for identifying potential drug targets in Aspergillus fumigatus.
Comput. Biol. Chem., 2014
2012
A structure-based protocol for learning the family-specific mechanisms of membrane-binding domains.
Bioinform., 2012
2010
Analysis of Combinatorial Regulation: Scaling of Partnerships between Regulators with the Number of Governed Targets.
PLoS Comput. Biol., 2010
Nucleic Acids Res., 2010
An improved machine learning protocol for the identification of correct Sequest search results.
BMC Bioinform., 2010
Genome-wide sequence-based prediction of peripheral proteins using a novel semi-supervised learning technique.
BMC Bioinform., 2010
2009
Co-Expression among Constituents of a Motif in the protein-protein Interaction Network.
J. Bioinform. Comput. Biol., 2009
2007
Finding new structural and sequence attributes to predict possible disease association of single amino acid polymorphism (SAP).
Bioinform., 2007
MeTaDoR: a comprehensive resource for membrane targeting domains and their host proteins.
Bioinform., 2007
2005
Int. J. Bioinform. Res. Appl., 2005
Correlation between gene expression profiles and protein-protein interactions within and across genomes.
Bioinform., 2005