# Yang Dai

According to our database

^{1}, Yang Dai## Timeline

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Book In proceedings Article PhD thesis Other## Links

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## Bibliography

2017

Using convolutional neural networks to explore the microbiome.

Proceedings of the 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2017

Phenotyping hypotensive patients in critical care using hospital discharge summaries.

Proceedings of the 2017 IEEE EMBS International Conference on Biomedical & Health Informatics, 2017

Detection of Differential Abundance Intervals in Longitudinal Metagenomic Data Using Negative Binomial Smoothing Spline ANOVA.

Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

Microbiome Dynamics as Predictors of Lung Transplant Rejection.

Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

2016

$k$-core percolation on complex networks: Comparing random, localized and targeted attacks.

CoRR, 2016

2015

Regulatory Elements in Low-Methylated Regions Predict Directional Change of Gene Expression.

IEEE J. Biomedical and Health Informatics, 2015

Contagion in a Financial System.

Proceedings of the Information Systems Development: Transforming Healthcare through Information Systems, 2015

2014

Focusing on Centrality Measure in Emergency Medical Services.

Proceedings of the 18th Pacific Asia Conference on Information Systems, 2014

Using metabolomic and transportomic modeling and machine learning to identify putative novel therapeutic targets for antibiotic resistant Pseudomonad infections.

Proceedings of the 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2014

A Model-based approach to transcription regulatory network reconstruction from time-course gene expression data.

Proceedings of the 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2014

Exploring regulatory elements in low-methylated regions for gene expression prediction.

Proceedings of the 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2014

2013

Parallel Computation Efficiency Analysis of Numerical Simulation of Copper Flash Smelting Furnace.

Proceedings of the 10th IEEE International Conference on High Performance Computing and Communications & 2013 IEEE International Conference on Embedded and Ubiquitous Computing, 2013

2011

Analysis of interrelationships between Suppliers configuration and performance within the supply network: A simulation approach.

Proceedings of the 17th International Conference on Automation and Computing, 2011

Identifying Transcription Factors and microRNAs as Key Regulators of Pathways Using Bayesian Inference on Known Pathway Structures.

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011

2010

Incorporating Network Topology Improves Prediction of Protein Interaction Networks from Transcriptomic Data.

IJKDB, 2010

Game Model Analysis of Government Incentive Measures to Enterprises Technological Innovation.

Proceedings of the International Conference on E-Business and E-Government, 2010

2009

Using Gene Expression Modeling to Determine Biological Relevance of Putative Regulatory Networks.

Proceedings of the Bioinformatics Research and Applications, 5th International Symposium, 2009

Global Synchronization of Generalized Complex Networks with Mixed Coupling Delays.

Proceedings of the Complex Sciences, 2009

Synchronization of Complex Networks with Time-Varying Coupling Delay via Impulsive Control.

Proceedings of the Complex Sciences, 2009

Selection of Multiple SNPs in Case-Control Association Study Using a Discretized Network Flow Approach.

Proceedings of the Bioinformatics and Computational Biology, 2009

2008

Provably Fast Training Algorithms for Support Vector Machines.

Theory Comput. Syst., 2008

Rank-based edge reconstruction for scale-free genetic regulatory networks.

BMC Bioinformatics, 2008

Incorporating Knowledge of Topology Improves Reconstruction of Interaction Networks from Microarray Data.

Proceedings of the Bioinformatics Research and Applications, 2008

Incorporating Literature Knowledge in Bayesian Network for Inferring Gene Networks with Gene Expression Data.

Proceedings of the Bioinformatics Research and Applications, 2008

2007

A statistical method to incorporate biological knowledge for generating testable novel gene regulatory interactions from microarray experiments.

BMC Bioinformatics, 2007

2006

Direct Prediction of T-cell Epitopes Using Support Vector Machines with Novel Sequence Encoding Schemes.

J. Bioinformatics and Computational Biology, 2006

Assessing protein similarity with Gene Ontology and its use in subnuclear localization prediction.

BMC Bioinformatics, 2006

2005

A Class of New Kernels Based on High-Scored Pairs of k-Peptides for SVMs and Its Application for Prediction of Protein Subcellular Localization.

Trans. Computational Systems Biology, 2005

Conical Partition Algorithm for Maximizing the Sum of dc Ratios.

J. Global Optimization, 2005

Efficient Algorithms and Implementations for Optimizing the Sum of Linear Fractional Functions, with Applications.

J. Comb. Optim., 2005

Improved protein fold assignment using support vector machines.

IJBRA, 2005

An SVM-based system for predicting protein subnuclear localizations.

BMC Bioinformatics, 2005

Prediction of MHC class II binders using the ant colony search strategy.

Artificial Intelligence in Medicine, 2005

A New Kernel Based on High-Scored Pairs of Tri-peptides and Its Application in Prediction of Protein Subcellular Localization.

Proceedings of the Computational Science, 2005

A support vector machine approach for prediction of T Cell epitopes.

Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore, 2005

2004

A Novel Approach for Prediction of Protein Subcellular Localization from Sequence Using Fourier Analysis and Support Vector Machines.

Proceedings of the 4th ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2004), 2004

2003

Feature Selection of Support Vector Regression for Quantitative Structure-Activity Relationships (QSAR).

Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Scienes, 2003

Reducing large diagonals in kernel matrices through semidefinite programming.

Proceedings of the 3nd ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2003), 2003

Building Text Classifiers Using Positive and Unlabeled Examples.

Proceedings of the 3rd IEEE International Conference on Data Mining (ICDM 2003), 2003

2001

Provably Fast Training Algorithms for Support Vector Machines.

Proceedings of the 2001 IEEE International Conference on Data Mining, 29 November, 2001

A Random Sampling Technique for Training Support Vector Machines.

Proceedings of the Algorithmic Learning Theory, 12th International Conference, 2001

2000

LMT-skeleton heuristics for several new classes of optimal triangulations.

Comput. Geom., 2000

Optimizing the sum of linear fractional functions and applications.

Proceedings of the Eleventh Annual ACM-SIAM Symposium on Discrete Algorithms, 2000

1998

On Computing New Classes of Optimal Trangulations with Angular Constraints.

Proceedings of the Computing and Combinatorics, 4th Annual International Conference, 1998

1997

A New Probabilistic Analysis of Karger's Randomized Algorithm for Minimum Cut Problems.

Inf. Process. Lett., 1997

1996

A New Unifying Heuristic Algorithm for the Undirected Minimum Cut Problems Using Minimum Range Cut Algorithms.

Discrete Applied Mathematics, 1996

1994

A continuous deformation algorithm for variational inequality problems on polytopes.

Math. Program., 1994

1993

Linear Stationary Point Problems on Unbounded Polyhedra.

Math. Oper. Res., 1993

How to Treat Delete Requests in Semi-Online Problems.

Proceedings of the Algorithms and Computation, 4th International Symposium, 1993

1992

A variable dimension algorithm with the Dantzig-Wolfe decomposition for structured stationary point problems.

ZOR - Meth. & Mod. of OR, 1992

1991

A Simplicial Algorithm for the Nonlinear Stationary Point Problem on an Unbounded Polyhedron.

SIAM Journal on Optimization, 1991