Jan Kybic

According to our database, Jan Kybic authored at least 85 papers between 1996 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Learning to Segment From Object Thickness Annotations.

Denis Barucic, Jan Kybic

Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023

2022

Biomedical image analysis competitions: The state of current participation practice.

Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Patrick Godau, Veronika Cheplygina, Michal Kozubek, Sharib Ali, Anubha Gupta, Jan Kybic, J. Alison Noble, Carlos Ortiz-de-Solórzano, Samiksha Pachade, Caroline Petitjean, Daniel Sage, Donglai Wei, Elizabeth Wilden, Deepak Alapatt, Vincent Andrearczyk, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Vivek Singh Bawa, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Jinwook Choi, Olivier Commowick, Marie Daum, Adrien Depeursinge, Reuben Dorent, Jan Egger, Hannah Eichhorn, Sandy Engelhardt, Melanie Ganz, Gabriel Girard, Lasse Hansen, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Hyunjeong Kim, Bennett A. Landman, Hongwei Bran Li, Jianning Li, Jun Ma, Anne L. Martel, et al.

CoRR, 2022

Characterization of drug effects on cell cultures from phase-contrast microscopy images.

Denis Barucic, Sumit Kaushik, Jan Kybic, Jarmila Stanková, Petr Dzubák, Marián Hajdúch

Comput. Biol. Medicine, 2022

Learning to segment cell nuclei in phase-contrast microscopy from fluorescence images for drug discovery.

Hana Mertanová, Jan Kybic, Jarmila Stanková, Petr Dzubák, Marián Hajdúch

Proceedings of the Medical Imaging 2022: Image Processing, 2022

Learning to Segment from Object Sizes.

Denis Barucic, Jan Kybic

Proceedings of the 22nd Conference Information Technologies, 2022

Fast Learning from Label Proportions with Small Bags.

Denis Barucic, Jan Kybic

Proceedings of the 2022 IEEE International Conference on Image Processing, 2022

2021

Automatic evaluation of human oocyte developmental potential from microscopy images.

Denis Barucic, Jan Kybic, Olga Teplá, Zinovij Topurko, Irena Kratochvílová

CoRR, 2021

Potential Biomarkers From Positive Definite 4th Order Tensors In Hardi.

Sumit Kaushik, Jan Kybic, Avinash Bansal, Temesgen Bihonegn, Jan Slovak

Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

2020

ANHIR: Automatic Non-Rigid Histological Image Registration Challenge.

Jirí Borovec, Jan Kybic, Ignacio Arganda-Carreras, Dmitry V. Sorokin, Gloria Bueno, Alexander V. Khvostikov, Spyridon Bakas, Eric I-Chao Chang, Stefan Heldmann, Kimmo Kartasalo, Leena Latonen, Johannes Lotz, Michelle Noga, Sarthak Pati, Kumaradevan Punithakumar, Pekka Ruusuvuori, Andrzej Skalski, Nazanin Tahmasebi, Masi Valkonen, Ludovic Venet, Yizhe Wang, Nick Weiss, Marek Wodzinski, Yu Xiang, Yan Xu, Yan Yan, Paul A. Yushkevich, Shengyu Zhao, Arrate Muñoz-Barrutia

IEEE Trans. Medical Imaging, 2020

Multiple Instance Learning Via Deep Hierarchical Exploration for Histology Image Classification.

Jan Hering, Jan Kybic

Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

Generalized Multiple Instance Learning for Cancer Detection in Digital Histopathology.

Jan Hering, Jan Kybic

Proceedings of the Image Analysis and Recognition - 17th International Conference, 2020

2018

Reconstructing Evolving Tree Structures in Time Lapse Sequences by Enforcing Time-Consistency.

Przemyslaw Glowacki, Miguel Amável Pinheiro, Agata Mosinska, Engin Türetken, Daniel Lebrecht, Raphael Sznitman, Anthony Holtmaat, Jan Kybic, Pascal Fua

IEEE Trans. Pattern Anal. Mach. Intell., 2018

Detecting multiple myeloma via generalized multiple-instance learning.

Jan Hering, Jan Kybic, Lukás Lambert

Proceedings of the Medical Imaging 2018: Image Processing, 2018

Fast Registration by Boundary Sampling and Linear Programming.

Jan Kybic, Jirí Borovec

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Incremental B-spline deformation model for geometric graph matching.

Miguel Amável Pinheiro, Jan Kybic

Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018

Benchmarking of Image Registration Methods for Differently Stained Histological Slides.

Jirí Borovec, Arrate Muñoz-Barrutia, Jan Kybic

Proceedings of the 2018 IEEE International Conference on Image Processing, 2018

2017

Geometric Graph Matching Using Monte Carlo Tree Search.

Miguel Amável Pinheiro, Jan Kybic, Pascal Fua

IEEE Trans. Pattern Anal. Mach. Intell., 2017

Supervised and unsupervised segmentation using superpixels, model estimation, and graph cut.

Jirí Borovec, Jan Svihlík, Jan Kybic, David Habart

J. Electronic Imaging, 2017

Region growing using superpixels with learned shape prior.

Jirí Borovec, Jan Kybic, Akihiro Sugimoto

J. Electronic Imaging, 2017

Left ventricle Hermite-based segmentation.

Jimena Olveres, Rodrigo Nava, Boris Escalante-Ramírez, Enrique Vallejo, Jan Kybic

Comput. Biol. Medicine, 2017

Detection and Localization of Drosophila Egg Chambers in Microscopy Images.

Jirí Borovec, Jan Kybic, Rodrigo Nava

Proceedings of the Machine Learning in Medical Imaging - 8th International Workshop, 2017

2016

Fully automated classification of bone marrow infiltration in low-dose CT of patients with multiple myeloma based on probabilistic density model and supervised learning.

Francisco Martinez-Martinez, Jan Kybic, Lukás Lambert, Zuzana Mecková

Comput. Biol. Medicine, 2016

Automated separation of merged Langerhans islets.

Jan Svihlík, Jan Kybic, David Habart

Proceedings of the Medical Imaging 2016: Image Processing, 2016

Comparison of volume estimation methods for pancreatic islet cells.

Jirí Dvorák, Jan Svihlík, David Habart, Jan Kybic

Proceedings of the Medical Imaging 2016: Biomedical Applications in Molecular, Structural, and Functional Imaging, San Diego, California, United States, 27 February, 2016

Characterization of hematologic malignancies based on discrete orthogonal moments.

Rodrigo Nava, Germán González, Jan Kybic, Boris Escalante-Ramírez

Proceedings of the Sixth International Conference on Image Processing Theory, 2016

Langerhans Islet Volume Estimation from 3D Optical Projection Tomography.

Jan Svihlík, Jan Kybic, David Habart, Hanna Hlushak, Jirí Dvorák, Barbora Radochová

Proceedings of the Computer Vision - ACCV 2016 Workshops, 2016

Binary Pattern Dictionary Learning for Gene Expression Representation in Drosophila Imaginal Discs.

Jirí Borovec, Jan Kybic

Proceedings of the Computer Vision - ACCV 2016 Workshops, 2016

2015

Non-Rigid Graph Registration Using Active Testing Search.

Eduard Serradell, Miguel Amável Pinheiro, Raphael Sznitman, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua

IEEE Trans. Pattern Anal. Mach. Intell., 2015

Classification of Tumor Epithelium and Stroma in Colorectal Cancer Based on Discrete Tchebichef Moments.

Rodrigo Nava, Germán González, Jan Kybic, Boris Escalante-Ramírez

Proceedings of the Clinical Image-Based Procedures. Translational Research in Medical Imaging, 2015

Geometrical graph matching using Monte Carlo tree search.

Miguel Amável Pinheiro, Jan Kybic

Proceedings of the 2015 IEEE International Conference on Image Processing, 2015

Supertexton-based segmentation in early Drosophila oogenesis.

Rodrigo Nava, Jan Kybic

Proceedings of the 2015 IEEE International Conference on Image Processing, 2015

Automatic detection of bone marrow infiltration by multiple myeloma detection in low-dose CT.

Francisco Martinez-Martinez, Jan Kybic, Lukás Lambert

Proceedings of the 2015 IEEE International Conference on Image Processing, 2015

Fast registration of segmented images by normal sampling.

Jan Kybic, Martin Dolejsi, Jirí Borovec

Proceedings of the 2015 IEEE Conference on Computer Vision and Pattern Recognition Workshops, 2015

2014

Organ-focused mutual information for nonrigid multimodal registration of liver CT and Gd-EOB-DTPA-enhanced MRI.

Laura Fernandez-de-Manuel, Gert Wollny, Jan Kybic, Daniel Jimenez-Carretero, Jose M. Tellado, Enrique Ramon, Manuel Desco, Andrés Santos, Javier Pascau, María J. Ledesma-Carbayo

Medical Image Anal., 2014

Classification of microscopy images of Langerhans islets.

Jan Svihlík, Jan Kybic, David Habart, Zuzana Berková, Peter Girman, Jan Kríz, Klára Zacharovová

Proceedings of the Medical Imaging 2014: Image Processing, 2014

Registration of segmented histological images using thin plate splines and belief propagation.

Jan Kybic

Proceedings of the Medical Imaging 2014: Image Processing, 2014

Neuromuscular fiber segmentation through particle filtering and discrete optimization.

Thomas Dietenbeck, François Varray, Jan Kybic, Olivier Basset, Christian Cachard

Proceedings of the Medical Imaging 2014: Image Processing, 2014

Automatic simultaneous segmentation and fast registration of histological images.

Jan Kybic, Jirí Borovec

Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

Path Descriptors for Geometric Graph Matching and Registration.

Miguel Amável Pinheiro, Jan Kybic

Proceedings of the Image Analysis and Recognition - 11th International Conference, 2014

Reconstructing Evolving Tree Structures in Time Lapse Sequences.

Przemyslaw Glowacki, Miguel Amável Pinheiro, Engin Türetken, Raphael Sznitman, Daniel Lebrecht, Jan Kybic, Anthony Holtmaat, Pascal Fua

Proceedings of the 2014 IEEE Conference on Computer Vision and Pattern Recognition, 2014

2013

Line filtering for surgical tool localization in 3D ultrasound images.

Marian Uhercik, Jan Kybic, Yue Zhao, Christian Cachard, Hervé Liebgott

Comput. Biol. Medicine, 2013

Registration of multiple stained histological sections.

Jirí Borovec, Jan Kybic, Michael Busta, Carlos Ortiz-de-Solorzano, Arrate Muñoz-Barrutia

Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

Active Testing Search for Point Cloud Matching.

Miguel Amável Pinheiro, Raphael Sznitman, Eduard Serradell, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua

Proceedings of the Information Processing in Medical Imaging, 2013

2012

Approximate all nearest neighbor search for high dimensional entropy estimation for image registration.

Jan Kybic, Ivan Vnucko

Signal Process., 2012

Robust elastic 2D/3D geometric graph matching.

Eduard Serradell, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua

Proceedings of the Medical Imaging 2012: Image Processing, 2012

A multi-frequency approach to increase the native resolution of ultrasound images.

François Varray, Christian Cachard, Jan Kybic, Anthony Novell, Ayache Bouakaz, Olivier Basset

Proceedings of the 20th European Signal Processing Conference, 2012

Robust non-rigid registration of 2D and 3D graphs.

Eduard Serradell, Przemyslaw Glowacki, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua

Proceedings of the 2012 IEEE Conference on Computer Vision and Pattern Recognition, 2012

2011

Bootstrap optical flow confidence and uncertainty measure.

Jan Kybic, Claudia Nieuwenhuis

Comput. Vis. Image Underst., 2011

Automatic colposcopy video tissue classification using higher order entropy-based image registration.

Juan D. García-Arteaga, Jan Kybic, Wenjing Li

Comput. Biol. Medicine, 2011

2010

Bootstrap Resampling for Image Registration Uncertainty Estimation Without Ground Truth.

Jan Kybic

IEEE Trans. Image Process., 2010

Model Fitting Using RANSAC for Surgical Tool Localization in 3-D Ultrasound Images.

Marian Uhercik, Jan Kybic, Hervé Liebgott, Christian Cachard

IEEE Trans. Biomed. Eng., 2010

2009

Respiratory Motion Estimation from Cone-Beam Projections Using a Prior Model.

Jef Vandemeulebroucke, Jan Kybic, Patrick Clarysse, David Sarrut

Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

The Lung TIME: annotated lung nodule dataset and nodule detection framework.

Martin Dolejsi, Jan Kybic, Michal Polovincak, Stanislav Tuma

Proceedings of the Medical Imaging 2009: Computer-Aided Diagnosis, 2009

Discrete curvature calculation for fast level set segmentation.

Jan Kybic, Jakub Kratky

Proceedings of the International Conference on Image Processing, 2009

2008

2-D Locally Regularized Tissue Strain Estimation From Radio-Frequency Ultrasound Images: Theoretical Developments and Results on Experimental Data.

Elisabeth Brusseau, Jan Kybic, Jean-François Deprez, Olivier Basset

IEEE Trans. Medical Imaging, 2008

Three-dimensional segmentation of bones from CT and MRI using fast level sets.

Jakub Kratky, Jan Kybic

Proceedings of the Medical Imaging 2008: Image Processing, 2008

Multi-resolution parallel integral projection for fast localization of a straight electrode in 3D ultrasound images.

Marian Uhercik, Jan Kybic, Hervé Liebgott, Christian Cachard

Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Fast no ground truth image registration accuracy evaluation: Comparison of bootstrap and Hessian approaches.

Jan Kybic

Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Reducing false positive responses in lung nodule detector system by asymmetric adaboost.

Martin Dolejsi, Jan Kybic, Stanislav Tuma, Michal Polovincak

Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Regional image similarity criteria based on the Kozachenko-Leonenko entropy estimator.

Juan D. García-Arteaga, Jan Kybic

Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2008

2007

Geometric and information constraints for automatic landmark selection in colposcopy sequences.

Juan D. García-Arteaga, Jan Kybic, Jia Gu, Wenjing Li

Proceedings of the VISAPP 2007: Proceedings of the Second International Conference on Computer Vision Theory and Applications, Barcelona, Spain, March 8-11, 2007, 2007

Continuous criterion for parallel MRI reconstruction using B-spline approximation (PROBER).

Jan Petr, Jan Kybic

Proceedings of the Medical Imaging 2007: Image Processing, 2007

Automatic landmark detection for cervical image registration validation.

Juan D. García-Arteaga, Jan Kybic

Proceedings of the Medical Imaging 2007: Computer-Aided Diagnosis, 2007

Automatic two-step detection of pulmonary nodules.

Martin Dolejsi, Jan Kybic

Proceedings of the Medical Imaging 2007: Computer-Aided Diagnosis, 2007

High-Dimensional Entropy Estimation for Finite Accuracy Data: <i>R</i>-NN Entropy Estimator.

Jan Kybic

Proceedings of the Information Processing in Medical Imaging, 2007

2006

Incremental Updating of Nearest Neighbor-Based High-Dimensional Entropy Estimation.

Jan Kybic

Proceedings of the 2006 IEEE International Conference on Acoustics Speech and Signal Processing, 2006

Image Registration Accuracy Estimation Without Ground Truth Using Bootstrap.

Jan Kybic, Daniel Smutek

Proceedings of the Computer Vision Approaches to Medical Image Analysis, 2006

Consistent and Elastic Registration of Histological Sections Using Vector-Spline Regularization.

Ignacio Arganda-Carreras, Carlos Oscar Sánchez Sorzano, Roberto Marabini, José María Carazo, Carlos Ortiz-de-Solorzano, Jan Kybic

Proceedings of the Computer Vision Approaches to Medical Image Analysis, 2006

2005

Spatio-temporal nonrigid registration for ultrasound cardiac motion estimation.

María J. Ledesma-Carbayo, Jan Kybic, Manuel Desco, Andrés Santos, Michael Sühling, Patrick R. Hunziker, Michael Unser

IEEE Trans. Medical Imaging, 2005

A common formalism for the Integral formulations of the forward EEG problem.

Jan Kybic, Maureen Clerc, Touffic Abboud, Olivier D. Faugeras, Renaud Keriven, Théodore Papadopoulo

IEEE Trans. Medical Imaging, 2005

Computational Elastography from Standard Ultrasound Image Sequences by Global Trust Region Optimization.

Jan Kybic, Daniel Smutek

Proceedings of the Information Processing in Medical Imaging, 2005

Quantitative analysis of microarray images.

Leila Muresan, Bettina Heise, Erich-Peter Klement, Jan Kybic

Proceedings of the 2005 International Conference on Image Processing, 2005

2004

High-dimensional mutual information estimation for image registration.

Jan Kybic

Proceedings of the 2004 International Conference on Image Processing, 2004

2003

Fast parametric elastic image registration.

Jan Kybic, Michael Unser

IEEE Trans. Image Process., 2003

Symmetric BEM Formulation for the M/EEG Forward Problem.

Geoffray Adde, Maureen Clerc, Olivier D. Faugeras, Renaud Keriven, Jan Kybic, Théodore Papadopoulo

Proceedings of the Information Processing in Medical Imaging, 2003

2002

Generalized sampling: a variational approach .II. Applications.

Jan Kybic, Thierry Blu, Michael Unser

IEEE Trans. Signal Process., 2002

Generalized sampling: a variational approach .I. Theory.

Jan Kybic, Thierry Blu, Michael Unser

IEEE Trans. Signal Process., 2002

Cardiac ultrasound motion detection by elastic registration exploiting temporal coherence.

María J. Ledesma-Carbayo, Jan Kybic, Michael Sühling, Patrick R. Hunziker, Manuel Desco, Andrés Santos, Michael Unser

Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, 2002

The fast multipole method for the direct E/MEG problem.

Maureen Clerc, Olivier D. Faugeras, Renaud Keriven, Jan Kybic, Théodore Papadopoulo

Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, 2002

2001

Variational approach to tomographic reconstruction.

Jan Kybic, Thierry Blu, Michael A. Unser

Proceedings of the Medical Imaging 2001: Image Processing, 2001

Cardiac Motion Analysis from Ultrasound Sequences Using Non-rigid Registration.

María J. Ledesma-Carbayo, Jan Kybic, Manuel Desco, Andrés Santos, Michael Unser

Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

2000

Unwarping of Unidirectionally Distorted EPI Images.

Jan Kybic, Philippe Thévenaz, Arto Nirkko, Michael Unser

IEEE Trans. Medical Imaging, 2000

Multidimensional Elastic Registration of Images Using Splines.

Jan Kybic, Michael Unser

Proceedings of the 2000 International Conference on Image Processing, 2000

1999

Compensation of Unidirectional Geometric Distortion in EPI Using Spline Warping.

Jan Kybic, Philippe Thévenaz, Michael Unser

Proceedings of the 1999 International Conference on Image Processing, 1999

1996

Extended spectral subtraction.

Pavel Sovka, Petr Pollák, Jan Kybic

Proceedings of the 8th European Signal Processing Conference, 1996