Jean Peccoud

According to our database, Jean Peccoud authored at least 21 papers between 1991 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Stochastic model of vesicular stomatitis virus replication reveals mutational effects on virion production.

Connor R. King, Casey-Tyler Berezin, Jean Peccoud

PLoS Comput. Biol., February, 2024

2023

Ten simple rules for managing laboratory information.

Casey-Tyler Berezin, Luis U. Aguilera, Sonja Billerbeck, Philip E. Bourne, Douglas Densmore, Paul S. Freemont, Thomas E. Gorochowski, Sarah I. Hernandez, Nathan J. Hillson, Connor R. King, Michael Köpke, Shuyi Ma, Katie M. Miller, Tae Seok Moon, Jason H. Moore, Brian Munsky, Chris J. Myers, Dequina A. Nicholas, Samuel J. Peccoud, Wen Zhou, Jean Peccoud

PLoS Comput. Biol., December, 2023

Introduction to the Special Issue on BioFoundries and Cloud Laboratories.

Douglas Densmore, Nathan J. Hillson, Eric Klavins, Chris J. Myers, Jean Peccoud, Giovanni Stracquadanio

ACM J. Emerg. Technol. Comput. Syst., July, 2023

2020

Synthesizing DNA molecules with identity-based digital signatures to prevent malicious tampering and enabling source attribution.

Diptendu Mohan Kar, Indrajit Ray, Jenna Gallegos, Jean Peccoud, Indrakshi Ray

J. Comput. Secur., 2020

2018

CrossPlan: systematic planning of genetic crosses to validate mathematical models.

Aditya Pratapa, Neil Adames, Pavel K. Brazhnik, Nicholas Franzese, John J. Tyson, Jean Peccoud, T. M. Murali

Bioinform., 2018

Digital Signatures to Ensure the Authenticity and Integrity of Synthetic DNA Molecules.

Diptendu Mohan Kar, Indrajit Ray, Jenna Gallegos, Jean Peccoud

Proceedings of the New Security Paradigms Workshop, 2018

CrossPlan: Systematic Planning of Genetic Crosses to Validate Mathematical Models.

Aditya Pratapa, Neil Adames, Pavel K. Kraikivski, Nicholas Franzese, John J. Tyson, Jean Peccoud, T. M. Murali

Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018

2017

GraphSpace: stimulating interdisciplinary collaborations in network biology.

Aditya Bharadwaj, Divit P. Singh, Anna M. Ritz, Allison N. Tegge, Christopher L. Poirel, Pavel K. Brazhnik, Neil Adames, Kurt Luther, Shiv D. Kale, Jean Peccoud, John J. Tyson, T. M. Murali

Bioinform., 2017

2016

A Stochastic Model of the Yeast Cell Cycle Reveals Roles for Feedback Regulation in Limiting Cellular Variability.

Debashis Barik, David A. Ball, Jean Peccoud, John J. Tyson

PLoS Comput. Biol., 2016

2014

If You Can't Measure It, You Can't Manage It.

Jean Peccoud

PLoS Comput. Biol., 2014

Development of a domain-specific genetic language to design <i>Chlamydomonas reinhardtii</i> expression vectors.

Mandy L. Wilson, Sakiko Okumoto, Laura Adam, Jean Peccoud

Bioinform., 2014

2010

Co-Design in Synthetic Biology: A System-Level Analysis of the Development of an Environmental Sensing Device.

David A. Ball, Matthew W. Lux, Russell R. Graef, Matthew W. Peterson, Jane D. Valenti, John Dileo, Jean Peccoud

Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010

2009

Modeling Structure-Function Relationships in Synthetic DNA Sequences using Attribute Grammars.

Yizhi Cai, Matthew W. Lux, Laura Adam, Jean Peccoud

PLoS Comput. Biol., 2009

Writing DNA with GenoCAD^TM.

Michael J. Czar, Yizhi Cai, Jean Peccoud

Nucleic Acids Res., 2009

2007

Möbius: an integrated discrete-event modeling environment.

Jean Peccoud, Tod Courtney, William H. Sanders

Bioinform., 2007

A syntactic model to design and verify synthetic genetic constructs derived from standard biological parts.

Yizhi Cai, Brian Hartnett, Claes Gustafsson, Jean Peccoud

Bioinform., 2007

2006

Dynamic partitioning for hybrid simulation of the bistable HIV-1 transactivation network.

Mark Griffith, Tod Courtney, Jean Peccoud, William H. Sanders

Bioinform., 2006

2005

Parameterization of a Nonlinear Genotype to Phenotype Map Using Molecular Networks.

Jean Peccoud, Kent Vander Velden

Proceedings of the Biocomputing 2005, 2005

2003

Modeling networks of molecular interactions in the living cell: structure, dynamics, and applications.

Kent Vander Velden, Jean Peccoud

Proceedings of the 10th International Workshop on Petri Nets and Performance Models, 2003

1999

Analysis of the Stabilizing Effect of ROM on the Genetic Network Controlling ColE1 Plasmid Replication.

P. J. E. Goss, Jean Peccoud

Proceedings of the 4th Pacific Symposium on Biocomputing, 1999

1991

Dissection moléculaire du site de fixation de l'antigène d'une molécule d'histocompatibilité de classe II et modélisation stochastique des interactions macromoléculaires au sein de la cellule vivante. (Molecular dissection of the antigen binding site of a major histocompatibility complex class II molecule and stochastic modelling of macromolecular interactions in the living cell).

Jean Peccoud

PhD thesis, 1991