Jill L. Wegrzyn

According to our database, Jill L. Wegrzyn authored at least 14 papers between 2008 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2021

Tripal, a community update after 10 years of supporting open source, standards-based genetic, genomic and breeding databases.

Margaret Staton, Ethalinda Cannon, Lacey-Anne Sanderson, Jill L. Wegrzyn, Tavis K. Anderson, Sean Buehler, Irene Cobo-Simón, Kay Faaberg, Emily S. Grau, Valentin Guignon, Jessica Gunoskey, Blake Inderski, Sook Jung, Kelly Lager, Dorrie Main, Monica Poelchau, Risharde Ramnath, Peter Richter, Joe West, Stephen P. Ficklin

Briefings Bioinform., 2021

2020

Tripal and Galaxy: supporting reproducible scientific workflows for community biological databases.

Shawna Spoor, Connor Wytko, Brian Soto, Ming Chen, Abdullah Almsaeed, Bradford Condon, Nic Herndon, Heidi Hough, Sook Jung, Meg Staton, Jill L. Wegrzyn, Dorrie Main, F. Alex Feltus, Stephen P. Ficklin

Database J. Biol. Databases Curation, 2020

2019

15 years of GDR: New data and functionality in the Genome Database for Rosaceae.

Sook Jung, Taein Lee, Chun-Huai Cheng, Katheryn Buble, Ping Zheng, Jing Yu, Jodi L. Humann, Stephen P. Ficklin, Ksenija Gasic, Kristin Scott, Morgan Frank, Sushan Ru, Heidi Hough, Kate Evans, Cameron Peace, Mercy A. Olmstead, Lisa W. DeVetter, James McFerson, Michael Coe, Jill L. Wegrzyn, Margaret E. Staton, Albert G. Abbott, Dorrie Main

Nucleic Acids Res., 2019

gFACs: Gene Filtering, Analysis, and Conversion to Unify Genome Annotations Across Alignment and Gene Prediction Frameworks.

Madison Caballero, Jill L. Wegrzyn

Genom. Proteom. Bioinform., 2019

Tripal v3: an ontology-based toolkit for construction of FAIR biological community databases.

Shawna Spoor, Chun-Huai Cheng, Lacey-Anne Sanderson, Bradford Condon, Abdullah Almsaeed, Ming Chen, Anthony Bretaudeau, Helena Rasche, Sook Jung, Dorrie Main, Kirstin E. Bett, Margaret Staton, Jill L. Wegrzyn, F. Alex Feltus, Stephen P. Ficklin

Database J. Biol. Databases Curation, 2019

Tripal MapViewer: A tool for interactive visualization and comparison of genetic maps.

Katheryn Buble, Sook Jung, Jodi L. Humann, Jing Yu, Chun-Huai Cheng, Taein Lee, Stephen P. Ficklin, Heidi Hough, Bradford Condon, Margaret E. Staton, Jill L. Wegrzyn, Dorrie Main

Database J. Biol. Databases Curation, 2019

2018

Association Mapping for Forest Trees with CartograTree.

Nic Herndon, Taylor Falk, Emily S. Grau, Sook Jung, Stephen P. Ficklin, Dorrie Main, Margaret E. Staton, Jill L. Wegrzyn

Proceedings of the Application of Semantic Technology in Biodiversity Science, 2018

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture.

Lisa C. Harper, Jacqueline D. Campbell, Ethalinda K. S. Cannon, Sook Jung, Monica Poelchau, Ramona L. Walls, Carson M. Andorf, Elizabeth Arnaud, Tanya Z. Berardini, Clayton L. Birkett, Steven B. Cannon, James D. Carson, Bradford Condon, Laurel Cooper, Nathan A. Dunn, Christine G. Elsik, Andrew D. Farmer, Stephen P. Ficklin, David M. Grant, Emily S. Grau, Nic Herndon, Zhi-Liang Hu, Jodi L. Humann, Pankaj Jaiswal, Clément Jonquet, Marie-Angélique Laporte, Pierre Larmande, Gerard R. Lazo, Fiona McCarthy, Naama Menda, Christopher J. Mungall, Monica C. Munoz-Torres, Sushma Naithani, Rex T. Nelson, Daureen Nesdill, Carissa A. Park, James M. Reecy, Leonore Reiser, Lacey-Anne Sanderson, Taner Z. Sen, Margaret Staton, Sabarinath Subramaniam, Marcela Karey Tello-Ruiz, Victor Unda, Deepak R. Unni, Liya Wang, Doreen Ware, Jill L. Wegrzyn, Jason Williams, Margaret Woodhouse, Jing Yu, Doreen Main

Database J. Biol. Databases Curation, 2018

Growing and cultivating the forest genomics database, TreeGenes.

Taylor Falk, Nic Herndon, Emily S. Grau, Sean Buehler, Peter Richter, Sumaira Zaman, Eliza M. Baker, Risharde Ramnath, Stephen P. Ficklin, Margaret Staton, Frank Alex Feltus, Sook Jung, Doreen Main, Jill L. Wegrzyn

Database J. Biol. Databases Curation, 2018

2017

New extension software modules to enhance searching and display of transcriptome data in Tripal databases.

Ming Chen, Nathan Henry, Abdullah Almsaeed, Xiao Zhou, Jill L. Wegrzyn, Stephen P. Ficklin, Margaret Staton

Database J. Biol. Databases Curation, 2017

2016

CartograTree: Enabling landscape genomics for forest trees.

Nic Herndon, Emily S. Grau, Iman Batra, Steven A. Demurjian, Hans A. Vasquez-Gross, Margaret E. Staton, Jill L. Wegrzyn

PeerJ Prepr., 2016

2015

YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut.

Sandeep Chakraborty, Monica Britton, Jill L. Wegrzyn, Timothy Butterfield, Basuthkar J. Rao, Charles A. Leslie, Mallikarjuna Aradhaya, David B. Neale, Keith Woeste, Abhay Dandekar

F1000Research, 2015

2009

PineSAP - sequence alignment and SNP identification pipeline.

Jill L. Wegrzyn, Jennifer M. Lee, John Liechty, David B. Neale

Bioinform., 2009

2008

Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites.

Jill L. Wegrzyn, Thomas M. Drudge, Faramarz Valafar, Vivian Hook

BMC Bioinform., 2008