Marie-Angélique Laporte

According to our database, Marie-Angélique Laporte authored at least 19 papers between 2011 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Editorial: Knowledge graph technologies: the next Frontier of the food, agriculture, and water domains.

Catherine Roussey, Christophe Guéret, Marie-Angélique Laporte

Frontiers Artif. Intell., February, 2023

Ontologies for increasing the FAIRness of plant research data.

Kathryn Dumschott, Hannah Dörpholz, Marie-Angélique Laporte, Dominik Brilhaus, Andrea Schrader, Björn Usadel, Steffen Neumann, Elizabeth Arnaud, Angela Kranz

CoRR, 2023

Data sharing and ontology use among agricultural genetics, genomics, and breeding databases and resources of the Agbiodata Consortium.

Jennifer L. Clarke, Laurel D. Cooper, Monica F. Poelchau, Tanya Z. Berardini, Justin Elser, Andrew D. Farmer, Stephen P. Ficklin, Sunita Kumari, Marie-Angélique Laporte, Rex T. Nelson, Rie Sadohara, Peter Selby, Anne E. Thessen, Brandon Whitehead, Taner Z. Sen

Database J. Biol. Databases Curation, 2023

2020

The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems.

Elizabeth Arnaud, Marie-Angélique Laporte, Soonho Kim, Céline Aubert, Sabina Leonelli, Berta Miro, Laurel Cooper, Pankaj Jaiswal, Gideon Kruseman, Rosemary Shrestha, Pier Luigi Buttigieg, Christopher J. Mungall, Julian Pietragalla, Afolabi Agbona, Jacqueline Muliro, Jeffrey Detras, Vilma Hualla, Abhishek Rathore, Roma Rani Das, Ibnou Dieng, Guillaume Bauchet, Naama Menda, Cyril Pommier, Felix Shaw, David Lyon, Leroy Mwanzia, Henry Juarez, Enrico Bonaiuti, Brian Chiputwa, Oluremi Olatunbosun, Sandrine Auzoux, Esther Dzalé Yeumo, Lukas A. Mueller, Kevin A. T. Silverstein, Alexandra Lafargue, Erick Antezana, Medha Devare, Brian King

Patterns, 2020

The Plant Trait Ontology Links Wheat Traits for Crop Improvement and Genomics (short paper).

Laurel Cooper, Marie-Angélique Laporte, Justin Elser, Victoria Carollo Blake, Taner Z. Sen, Chris Mungall, Elizabeth Arnaud, Pankaj Jaiswal

Proceedings of the 11th International Conference on Biomedical Ontologies (ICBO) joint with the 10th Workshop on Ontologies and Data in Life Sciences (ODLS) and part of the Bolzano Summer of Knowledge (BoSK 2020), 2020

2019

BrAPI - an application programming interface for plant breeding applications.

Peter Selby, Rafael Abbeloos, Jan Erik Backlund, Martin Basterrechea Salido, Guillaume Bauchet, Omar E. Benites-Alfaro, Clayton L. Birkett, Viana C. Calaminos, Pierre Carceller, Guillaume Cornut, Bruno Vasques Costa, Jeremy D. Edwards, Richard Finkers, Star Yanxin Gao, Mehmood Ghaffar, Philip Glaser, Valentin Guignon, Puthick Hok, Andrzej Kilian, Patrick König, Jack Elendil B. Lagare, Matthias Lange, Marie-Angélique Laporte, Pierre Larmande, David S. LeBauer, David A Lyon, David F. Marshall, Dave Matthews, Iain Milne, Naymesh Mistry, Nicolas Morales, Lukas A. Mueller, Pascal Neveu, Evangelia Papoutsoglou, Brian Pearce, Ivan Perez-Masias, Cyril Pommier, Ricardo H. Ramirez-Gonzalez, Abhishek Rathore, Angel Manica Raquel, Sebastian Raubach, Trevor Rife, Kelly Robbins, Mathieu Rouard, Chaitanya Sarma, Uwe Scholz, Guilhem Sempéré, Paul D. Shaw, Reinhard Simon, Nahuel Soldevilla, Gordon Stephen, Qi Sun, Clarysabel Tovar, Grzegorz Uszynski, Maikel Verouden, The BrAPI consortium

Bioinform., 2019

2018

The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.

Laurel Cooper, Austin Meier, Marie-Angélique Laporte, Justin Elser, Chris Mungall, Brandon T. Sinn, Dario Cavaliere, Seth Carbon, Nathan A. Dunn, Barry Smith, Botong Qu, Justin Preece, Eugene Zhang, Sinisa Todorovic, Georgios V. Gkoutos, John H. Doonan, Dennis W. Stevenson, Elizabeth Arnaud, Pankaj Jaiswal

Nucleic Acids Res., 2018

AgroPortal: A vocabulary and ontology repository for agronomy.

Clément Jonquet, Anne Toulet, Elizabeth Arnaud, Sophie Aubin, Esther Dzalé Yeumo Kaboré, Vincent Emonet, John Graybeal, Marie-Angélique Laporte, Mark A. Musen, Valeria Pesce, Pierre Larmande

Comput. Electron. Agric., 2018

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture.

Lisa C. Harper, Jacqueline D. Campbell, Ethalinda K. S. Cannon, Sook Jung, Monica Poelchau, Ramona L. Walls, Carson M. Andorf, Elizabeth Arnaud, Tanya Z. Berardini, Clayton L. Birkett, Steven B. Cannon, James D. Carson, Bradford Condon, Laurel Cooper, Nathan A. Dunn, Christine G. Elsik, Andrew D. Farmer, Stephen P. Ficklin, David M. Grant, Emily S. Grau, Nic Herndon, Zhi-Liang Hu, Jodi L. Humann, Pankaj Jaiswal, Clément Jonquet, Marie-Angélique Laporte, Pierre Larmande, Gerard R. Lazo, Fiona McCarthy, Naama Menda, Christopher J. Mungall, Monica C. Munoz-Torres, Sushma Naithani, Rex T. Nelson, Daureen Nesdill, Carissa A. Park, James M. Reecy, Leonore Reiser, Lacey-Anne Sanderson, Taner Z. Sen, Margaret Staton, Sabarinath Subramaniam, Marcela Karey Tello-Ruiz, Victor Unda, Deepak R. Unni, Liya Wang, Doreen Ware, Jill L. Wegrzyn, Jason Williams, Margaret Woodhouse, Jing Yu, Doreen Main

Database J. Biol. Databases Curation, 2018

OOPS: The Ontology of Plant Stress, A Semi-Automated Standardization Methodology.

Austin Meier, Marie-Angélique Laporte, Justin Elser, Laurel Cooper, Justin Preece, Pankaj Jaiswal, Jorrit H. Poelen

Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

A Natural Language Processing Pipeline to Extract Phenotypic Data from Formal Taxonomic Descriptions with a Focus on Flagellate Plants.

Lorena Endara, J. Gordon Burleigh, Laurel Cooper, Pankaj Jaiswal, Marie-Angélique Laporte, Hong Cui

Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

2016

Annotating Germplasm to Planteome Reference Ontologies.

Austin Meier, Laurel Cooper, Justin Elser, Pankaj Jaiswal, Marie-Angélique Laporte

Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

Comparison of Ontology Mapping Techniques to Map Plant Trait Ontologies.

Marie-Angélique Laporte, Léo Valette, Laurel Cooper, Chris Mungall, Austin Meier, Pankaj Jaiswal, Elizabeth Arnaud

Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

Data-driven Agricultural Research for Development: A Need for Data Harmonization Via Semantics.

Medha Devare, Céline Aubert, Marie-Angélique Laporte, Léo Valette, Elizabeth Arnaud, Pier Luigi Buttigieg

Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

The Planteome Project.

Laurel Cooper, Austin Meier, Justin Elser, Justin Preece, Xu Xu, Ryan Kitchen, Botong Qu, Eugene Zhang, Sinisa Todorovic, Pankaj Jaiswal, Marie-Angélique Laporte, Elizabeth Arnaud, Seth Carbon, Chris Mungall, Barry Smith, Georgios V. Gkoutos, John H. Doonan

Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

2014

A Semantic Web Faceted Search System for Facilitating Building of Biodiversity and Ecosystems Services.

Marie-Angélique Laporte, Isabelle Mougenot, Eric Garnier, Ulrike Stahl, Lutz Maicher, Jens Kattge

Proceedings of the Data Integration in the Life Sciences - 10th International Conference, 2014

2012

ThesauForm - Traits: A web based collaborative tool to develop a thesaurus for plant functional diversity research.

Marie-Angélique Laporte, Isabelle Mougenot, Eric Garnier

Ecol. Informatics, 2012

2011

GreenPhylDB v2.0: comparative and functional genomics in plants.

Mathieu Rouard, Valentin Guignon, Christelle Aluome, Marie-Angélique Laporte, Gaëtan Droc, Christian Walde, Christian M. Zmasek, Christophe Périn, Matthieu G. Conte

Nucleic Acids Res., 2011

An Organizational Environment for in Silico Experiments in Molecular Biology.

Yuan Lin, Marie-Angélique Laporte, Lucile Soler, Isabelle Mouger, Thérèse Libourel

Proceedings of the Fourth International Workshop on REsource Discovery, 2011