Pankaj Jaiswal

According to our database1, Pankaj Jaiswal authored at least 43 papers between 2002 and 2021.

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Bibliography

2021
Gramene 2021: harnessing the power of comparative genomics and pathways for plant research.
Nucleic Acids Res., 2021

The Gene Ontology resource: enriching a GOld mine.
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Nucleic Acids Res., 2021

2020
The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems.
Patterns, 2020

Plant Reactome: a knowledgebase and resource for comparative pathway analysis.
Nucleic Acids Res., 2020

Ensembl Genomes 2020 - enabling non-vertebrate genomic research.
Nucleic Acids Res., 2020

The Plant Trait Ontology Links Wheat Traits for Crop Improvement and Genomics (short paper).
Proceedings of the 11th International Conference on Biomedical Ontologies (ICBO) joint with the 10th Workshop on Ontologies and Data in Life Sciences (ODLS) and part of the Bolzano Summer of Knowledge (BoSK 2020), 2020

2019
Classification of Smart City Research - a Descriptive Literature Review and Future Research Agenda.
Inf. Syst. Frontiers, 2019

Improving Publication Pipeline with Automated Biological Entity Detection and Validation Service.
Data Inf. Manag., 2019

Involving community in genes and pathway curation.
Database J. Biol. Databases Curation, 2019

Extracting Domain Information using Deep Learning.
Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), 2019

2018
'Computable' Phenotypes Enable Comparative and Predictive Phenomics Among Plant Species and Across Domains of Life.
Proceedings of the Application of Semantic Technology in Biodiversity Science, 2018

Gramene 2018: unifying comparative genomics and pathway resources for plant research.
Nucleic Acids Res., 2018

Expression Atlas: gene and protein expression across multiple studies and organisms.
Nucleic Acids Res., 2018

The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.
Nucleic Acids Res., 2018

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture.
Database J. Biol. Databases Curation, 2018

Planteome & BisQue: Automating Image Annotation with Ontologies using Deep-Learning Networks.
Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

OOPS: The Ontology of Plant Stress, A Semi-Automated Standardization Methodology.
Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

Domain Informational Vocabulary Extraction Experiences with Publication Pipeline Integration and Ontology Curation.
Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

A Natural Language Processing Pipeline to Extract Phenotypic Data from Formal Taxonomic Descriptions with a Focus on Flagellate Plants.
Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

2017
Plant Reactome: a resource for plant pathways and comparative analysis.
Nucleic Acids Res., 2017

Interactive design and visualization of N-ary relationships.
Proceedings of the SIGGRAPH ASIA 2017, Bangkok, Thailand, November 27 - 30, 2017, 2017

2016
Gramene 2016: comparative plant genomics and pathway resources.
Nucleic Acids Res., 2016

Expression Atlas update - an integrated database of gene and protein expression in humans, animals and plants.
Nucleic Acids Res., 2016

A Web Application for Extracting Key Domain Information for Scientific Publications Using Ontology.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

Enhancing Information Accessibility of Publications with Text Mining and Ontology.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

Planteome Gene Annotation Enrichment Analysis.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

Plant Image Segmentation and Annotation with Ontologies in BisQue.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

Annotating Germplasm to Planteome Reference Ontologies.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

Comparison of Ontology Mapping Techniques to Map Plant Trait Ontologies.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016


2014
Gramene 2013: comparative plant genomics resources.
Nucleic Acids Res., 2014

AISO: Annotation of Image Segments with Ontologies.
J. Biomed. Semant., 2014

2012
A plant disease extension of the Infectious Disease Ontology.
Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), 2012

Mapping of glossary terms from the Flora of North America to the Plant Ontology enhances both resources.
Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), 2012

Towards a Reference Plant Trait Ontology for Modeling Knowledge of Plant Traits and Phenotypes.
Proceedings of the KEOD 2012 - Proceedings of the International Conference on Knowledge Engineering and Ontology Development, Barcelona, Spain, 4, 2012

2011
Gramene database in 2010: updates and extensions.
Nucleic Acids Res., 2011

QlicRice: a web interface for abiotic stress responsive QTL and loci interaction channels in rice.
Database J. Biol. Databases Curation, 2011

Planteome annotation wiki: a semantic application for the community curation of plant genotypes and phenotypes.
Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences, 2011

2009
Gramene QTL database: development, content and applications.
Database J. Biol. Databases Curation, 2009

2008
Gramene: a growing plant comparative genomics resource.
Nucleic Acids Res., 2008

The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations.
Nucleic Acids Res., 2008

2006
Gramene: a bird's eye view of cereal genomes.
Nucleic Acids Res., 2006

2002
Gramene: a resource for comparative grass genomics.
Nucleic Acids Res., 2002


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