James M. Reecy

Orcid: 0000-0003-4602-0990

According to our database1, James M. Reecy authored at least 20 papers between 2006 and 2023.

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Bibliography

2023
A combinatorial approach implementing new database structures to facilitate practical data curation management of QTL, association, correlation and heritability data on trait variants.
Database J. Biol. Databases Curation, 2023

2022
Ten simple rules to ruin a collaborative environment.
PLoS Comput. Biol., 2022

Bringing the Animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services.
Nucleic Acids Res., 2022

2019
Building a livestock genetic and genomic information knowledgebase through integrative developments of Animal QTLdb and CorrDB.
Nucleic Acids Res., 2019

2018
High-performance epistasis detection in quantitative trait GWAS.
Int. J. High Perform. Comput. Appl., 2018

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture.
Database J. Biol. Databases Curation, 2018

2016
Developmental progress and current status of the Animal QTLdb.
Nucleic Acids Res., 2016

2015
The BioMart community portal: an innovative alternative to large, centralized data repositories.
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Nucleic Acids Res., 2015

RAPTR-SV: a hybrid method for the detection of structural variants.
Bioinform., 2015

Fast Epistasis Detection in Large-Scale GWAS for Intel Xeon Phi Clusters.
Proceedings of the 2015 IEEE TrustCom/BigDataSE/ISPA, 2015

2014
Discovery of biological networks using an optimized partial correlation coefficient with information theory algorithm on Stampede's Xeon and Xeon Phi processors.
Concurr. Comput. Pract. Exp., 2014

2013
Animal QTLdb: an improved database tool for livestock animal QTL/association data dissemination in the post-genome era.
Nucleic Acids Res., 2013

The Vertebrate Trait Ontology: a controlled vocabulary for the annotation of trait data across species.
J. Biomed. Semant., 2013

Optimizing the PCIT algorithm on stampede's Xeon and Xeon Phi processors for faster discovery of biological networks.
Proceedings of the Extreme Science and Engineering Discovery Environment: Gateway to Discovery, 2013

2011
The catfish genome database cBARBEL: an informatic platform for genome biology of ictalurid catfish.
Nucleic Acids Res., 2011

Extension of Animal QTLdb: QTL meta-analysis on the fly.
Proceedings of the ACM International Conference on Bioinformatics, 2011

2010
SNPlotz: a generic genome plot tool to aid the SNP association studies.
BMC Bioinform., 2010

2008
Identification of differentially expressed gene categories in microarray studies using nonparametric multivariate analysis.
Bioinform., 2008

2007
AnimalQTLdb: a livestock QTL database tool set for positional QTL information mining and beyond.
Nucleic Acids Res., 2007

2006
A Tool for Collaborative Construction of Large Biological Ontologies.
Proceedings of the 17th International Workshop on Database and Expert Systems Applications (DEXA 2006), 2006


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