Joel Dudley

According to our database1, Joel Dudley authored at least 55 papers between 2006 and 2021.

Collaborative distances:

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

On csauthors.net:

Bibliography

2021
Phe2vec: Automated disease phenotyping based on unsupervised embeddings from electronic health records.
Patterns, 2021

Predictive Modelling of Susceptibility to Substance Abuse, Mortality and Drug-Drug Interactions in Opioid Patients.
Frontiers Artif. Intell., 2021

2020
Sleep in the Natural Environment: A Pilot Study.
Sensors, 2020

Deep representation learning of electronic health records to unlock patient stratification at scale.
npj Digit. Medicine, 2020

Identification of therapeutic targets from genetic association studies using hierarchical component analysis.
BioData Min., 2020

Sepsis in the era of data-driven medicine: personalizing risks, diagnoses, treatments and prognoses.
Briefings Bioinform., 2020

Automated Phenotyping of Patients with Non-Alcoholic Fatty Liver Disease Reveals Clinically RelevantDisease Subtypes.
Proceedings of the Pacific Symposium on Biocomputing 2020, 2020

Scaling Structural Learning with NO-BEARS to Infer Causal Transcriptome Networks.
Proceedings of the Pacific Symposium on Biocomputing 2020, 2020

2019
Deep learning predicts hip fracture using confounding patient and healthcare variables.
npj Digit. Medicine, 2019

Natural Language Processing of Clinical Notes on Chronic Diseases: Systematic Review.
CoRR, 2019

PatientExploreR: an extensible application for dynamic visualization of patient clinical history from electronic health records in the OMOP common data model.
Bioinform., 2019

CANDI: an R package and Shiny app for annotating radiographs and evaluating computer-aided diagnosis.
Bioinform., 2019

Evaluation of patient re-identification using laboratory test orders and mitigation via latent space variables.
Proceedings of the Biocomputing 2019: Proceedings of the Pacific Symposium, 2019

Enhancing high-content imaging for studying microtubule networks at large-scale.
Proceedings of the Machine Learning for Healthcare Conference, 2019

2018
Reflecting health: smart mirrors for personalized medicine.
npj Digit. Medicine, 2018

Pharmacological risk factors associated with hospital readmission rates in a psychiatric cohort identified using prescriptome data mining.
BMC Medical Informatics Decis. Mak., 2018

Uncovering exposures responsible for birth season - disease effects: a global study.
J. Am. Medical Informatics Assoc., 2018

Processing of Electronic Health Records using Deep Learning: A review.
CoRR, 2018

Systematic analyses of drugs and disease indications in RepurposeDB reveal pharmacological, biological and epidemiological factors influencing drug repositioning.
Briefings Bioinform., 2018

Deep learning for healthcare: review, opportunities and challenges.
Briefings Bioinform., 2018

Loss-of-function of neuroplasticity-related genes confers risk for human neurodevelopmental disorders.
Proceedings of the Biocomputing 2018: Proceedings of the Pacific Symposium, 2018

Causal inference on electronic health records to assess blood pressure treatment targets: An application of the parametric g formula.
Proceedings of the Biocomputing 2018: Proceedings of the Pacific Symposium, 2018

Cell-specific prediction and application of drug-induced gene expression .
Proceedings of the Biocomputing 2018: Proceedings of the Pacific Symposium, 2018

Automated disease cohort selection using word embeddings from Electronic Health Records.
Proceedings of the Biocomputing 2018: Proceedings of the Pacific Symposium, 2018

Automatic processing of Electronic Medical Records using Deep Learning.
Proceedings of the 12th EAI International Conference on Pervasive Computing Technologies for Healthcare, 2018

2017
Predicting age by mining electronic medical records with deep learning characterizes differences between chronological and physiological age.
J. Biomed. Informatics, 2017

Automated cell type discovery and classification through knowledge transfer.
Bioinform., 2017

Translational bioinformatics in the era of real-time biomedical, health care and wellness data streams.
Briefings Bioinform., 2017

Predictive Modeling of Hospital Readmission Rates Using Electronic Medical Record-Wide Machine Learning: A Case-Study Using Mount Sinai Heart Failure Cohort.
Proceedings of the Biocomputing 2017: Proceedings of the Pacific Symposium, 2017

Exploring the Reproducibility of Probabilistic Causal Molecular Network Models>.
Proceedings of the Biocomputing 2017: Proceedings of the Pacific Symposium, 2017

Application of I-COMO device towards geographic disease enrichment pattern revealed from electronic medical record at a large Urban academic medical center.
Proceedings of the 11th EAI International Conference on Pervasive Computing Technologies for Healthcare, 2017

2016
Comparative analyses of population-scale phenomic data in electronic medical records reveal race-specific disease networks.
Bioinform., 2016

Interpreting functional effects of coding variants: challenges in proteome-scale prediction, annotation and assessment.
Briefings Bioinform., 2016

Healthcare Data Mining with Matrix Models.
Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2016

Deep Learning to Predict Patient Future Diseases from the Electronic Health Records.
Proceedings of the Advances in Information Retrieval, 2016

2015
An Integrative Pipeline for Multi-Modal Discovery of Disease Relationships.
Proceedings of the Biocomputing 2015: Proceedings of the Pacific Symposium, 2015

Session introduction.
Proceedings of the Biocomputing 2015: Proceedings of the Pacific Symposium, 2015

2012
Integrative Approach to Pain Genetics Identifies Pain Sensitivity Loci across Diseases.
PLoS Comput. Biol., 2012

Interpretome: A Freely Available, Modular, and Secure Personal Genome Interpretation Engine.
Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012

2011
Comparison of automated and human assignment of MeSH terms on publicly-available molecular datasets.
J. Biomed. Informatics, 2011

ProfileChaser: searching microarray repositories based on genome-wide patterns of differential expression.
Bioinform., 2011

Exploiting drug-disease relationships for computational drug repositioning.
Briefings Bioinform., 2011

Matching Cancer Genomes to Established Cell Lines for Personalized Oncology.
Proceedings of the Biocomputing 2011: Proceedings of the Pacific Symposium, 2011

2010
Network-Based Elucidation of Human Disease Similarities Reveals Common Functional Modules Enriched for Pluripotent Drug Targets.
PLoS Comput. Biol., 2010

Differentially Expressed RNA from Public Microarray Data Identifies Serum Protein Biomarkers for Cross-Organ Transplant Rejection and Other Conditions.
PLoS Comput. Biol., 2010

An integrative method for scoring candidate genes from association studies: application to warfarin dosing.
BMC Bioinform., 2010

Content-based microarray search using differential expression profiles.
BMC Bioinform., 2010

Latent physiological factors of complex human diseases revealed by independent component analysis of clinarrays.
BMC Bioinform., 2010

2009
A Quick Guide for Developing Effective Bioinformatics Programming Skills.
PLoS Comput. Biol., 2009

Identification of Discriminating Biomarkers for Human Disease Using Integrative Network Biology.
Proceedings of the Biocomputing 2009: Proceedings of the Pacific Symposium, 2009

2008
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences.
Briefings Bioinform., 2008

Enabling Integrative Genomic Analysis of High Impact Human Diseases Through Text Mining.
Proceedings of the Biocomputing 2008, 2008

Using SNOMED CT For Translational Genomics Data Integration.
Proceedings of the Third International Conference on Knowledge Representation in Medicine, Phoenix, Arizona, USA, May 31st, 2008

2007
Bioinformatics software for biologists in the genomics era.
Bioinform., 2007

2006
TimeTree: a public knowledge-base of divergence times among organisms.
Bioinform., 2006


  Loading...