Robert J. Carroll

According to our database, Robert J. Carroll authored at least 37 papers between 2012 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Developing and evaluating pediatric phecodes (Peds-Phecodes) for high-throughput phenotyping using electronic health records.

Monika E. Grabowska, Sara L. Van Driest, Jamie R. Robinson, Anna E. Patrick, Chris Guardo, Srushti Gangireddy, Henry H. Ong, QiPing Feng, Robert J. Carroll, Prince J. Kannankeril, Wei-Qi Wei

J. Am. Medical Informatics Assoc., January, 2024

2023

Next-generation phenotyping: introducing phecodeX for enhanced discovery research in medical phenomics.

Megan M. Shuey, William W. Stead, Ida Aka, April L. Barnado, Lisa Bastarache, Elly Brokamp, Meredith Campbell, Robert J. Carroll, Jeffrey A. Goldstein, Adam Lewis, Beth A. Malow, Jonathan D. Mosley, Travis Osterman, Dolly A Padovani-Claudio, Andrea Ramirez, Dan M. Roden, Bryce A Schuler, Edward Siew, Jennifer Sucre, Isaac Thomsen, Rory J. Tinker, Sara Van Driest, Colin Walsh, Jeremy L. Warner, Quinn Stanton Wells, Lee E. Wheless

Bioinform., October, 2023

Managing re-identification risks while providing access to the <i>All of Us</i> research program.

Weiyi Xia, Melissa A. Basford, Robert J. Carroll, Ellen Wright Clayton, Paul A. Harris, Murat Kantarcioglu, Yongtai Liu, Steve Nyemba, Yevgeniy Vorobeychik, Zhiyu Wan, Bradley A. Malin

J. Am. Medical Informatics Assoc., April, 2023

Characterizing variability of electronic health record-driven phenotype definitions.

Pascal S. Brandt, Abel N. Kho, Yuan Luo, Jennifer A. Pacheco, Theresa L. Walunas, Hakon Hakonarson, George Hripcsak, Cong Liu, Ning Shang, Chunhua Weng, Nephi Walton, David S. Carrell, Paul K. Crane, Eric B. Larson, Christopher G. Chute, Iftikhar J. Kullo, Robert J. Carroll, Joshua C. Denny, Andrea H. Ramirez, Wei-Qi Wei, Jyotishman Pathak, Laura K. Wiley, Rachel L. Richesson, Justin B. Starren, Luke V. Rasmussen

J. Am. Medical Informatics Assoc., February, 2023

2022

The <i>All of Us</i> Research Program: Data quality, utility, and diversity.

Andrea H. Ramirez, Lina M. Sulieman, David J. Schlueter, Alese E. Halvorson, Jun Qian, Francis Ratsimbazafy, Roxana Loperena-Cortes, Kelsey R. Mayo, Melissa A. Basford, Nicole Deflaux, Karthik Muthuraman, Karthik Natarajan, Abel N. Kho, Hua Xu, Consuelo H. Wilkins, Hoda Anton-Culver, Eric Boerwinkle, Mine Cicek, Cheryl R. Clark, Elizabeth Cohn, Lucila Ohno-Machado, Sheri D. Schully, Brian K. Ahmedani, Maria Argos, Robert M. Cronin, Christopher J. O'Donnell, Mona Fouad, David B. Goldstein, Philip Greenland, Scott J. Hebbring, Elizabeth W. Karlson, Parinda Khatri, Bruce Korf, Jordan W. Smoller, Stephen Sodeke, John Wilbanks, Justin Hentges, Stephen Mockrin, Christopher Lunt, Stephanie A. Devaney, Kelly Gebo, Joshua C. Denny, Robert J. Carroll, David Glazer, Paul A. Harris, George Hripcsak, Anthony A. Philippakis, Dan M. Roden

Patterns, 2022

Under-specification as the source of ambiguity and vagueness in narrative phenotype algorithm definitions.

Jingzhi Yu, Jennifer A. Pacheco, Anika S. Ghosh, Yuan Luo, Chunhua Weng, Ning Shang, Barbara Benoit, David S. Carrell, Robert J. Carroll, Ozan Dikilitas, Robert R. Freimuth, Vivian S. Gainer, Hakon Hakonarson, George Hripcsak, Iftikhar J. Kullo, Frank D. Mentch, Shawn N. Murphy, Peggy L. Peissig, Andrea H. Ramirez, Nephi Walton, Wei-Qi Wei, Luke V. Rasmussen

BMC Medical Informatics Decis. Mak., 2022

Comparing medical history data derived from electronic health records and survey answers in the <i>All of Us</i> Research Program.

Lina M. Sulieman, Robert M. Cronin, Robert J. Carroll, Karthik Natarajan, Kayla Marginean, Brandy Mapes, Dan M. Roden, Paul A. Harris, Andrea H. Ramirez

J. Am. Medical Informatics Assoc., 2022

Inference-based correction of multi-site height and weight measurement data in the <i>All of Us</i> research program.

Mirza S. Khan, Robert J. Carroll

J. Am. Medical Informatics Assoc., 2022

Harmonizing FHIR and Common Data Models Used in Research: Current State and a Path Forward.

Teresa Zayas-Cabán, Belinda Seto, Robert J. Carroll, Jon Duke, Viet Nguyen

Proceedings of the AMIA 2022, 2022

Assessing Data Quality and Diversity in the All of Us.

Lina Sulieman, Jennifer Zhang, Kayla Marginean, Paul A. Harris, Robert J. Carroll

Proceedings of the AMIA 2022, 2022

Self-paced Training Modality to Promote the Use of All of Us Researcher Workbench in Educational and Research Settings.

Hiral Master, Lina Sulieman, Paul A. Harris, Karthik Natarajan, Robert J. Carroll, Kayla Marginean, Kelsey R. Mayo, Aymone Kouame, Michael Lyons

Proceedings of the AMIA 2022, 2022

2021

Medical records-based chronic kidney disease phenotype for clinical care and "big data" observational and genetic studies.

Ning Shang, Atlas Khan, Fernanda Polubriaginof, Francesca Zanoni, Karla Mehl, David Fasel, Paul E. Drawz, Robert J. Carroll, Joshua C. Denny, Matthew A. Hathcock, Adelaide M. Arruda-Olson, Peggy L. Peissig, Richard A. Dart, Murray H. Brilliant, Eric B. Larson, David S. Carrell, Sarah A. Pendergrass, Shefali Setia Verma, Marylyn D. Ritchie, Barbara Benoit, Vivian S. Gainer, Elizabeth W. Karlson, Adam S. Gordon, Gail P. Jarvik, Ian B. Stanaway, David R. Crosslin, Sumit Mohan, Iuliana Ionita-Laza, Nicholas P. Tatonetti, Ali G. Gharavi, George Hripcsak, Chunhua Weng, Krzysztof Kiryluk

npj Digit. Medicine, 2021

Comparison of family health history in surveys vs electronic health record data mapped to the observational medical outcomes partnership data model in the All of Us Research Program.

Robert M. Cronin, Alese E. Halvorson, Cassie Springer, Xiaoke Feng, Lina M. Sulieman, Roxana Loperena-Cortes, Kelsey R. Mayo, Robert J. Carroll, Qingxia Chen, Brian K. Ahmedani, Jason Karnes, Bruce Korf, Christopher J. O'Donnell, Jun Qian, Andrea H. Ramirez

J. Am. Medical Informatics Assoc., 2021

Measuring the correctness of All of Us physical measurement.

Lina Sulieman, Karthik Natarajan, Qingxia Chen, Robert J. Carroll, Kayla Marginean, Paul A. Harris, Andrea H. Ramirez

Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020

The All of Us Research Program Researcher Workbench: Cloud based access and analytics to advance precision medicine.

Andrea H. Ramirez, Kelsey R. Mayo, Robert J. Carroll, Karthik Muthuraman, Melissa A. Basford, David Glazer, Paul A. Harris, Anthony A. Philippakis, Dan M. Roden

Proceedings of the AMIA 2020, 2020

The All of Us Research Program Researcher Workbench Phenotype Library: Five Disease Implementations.

Izabelle P. Humes, Roxana Loperena-Cortes, Melissa A. Basford, Kelsey R. Mayo, Joseph DiPaolo, David J. Schlueter, Jun Qian, Wei-Qi Wei, Robert J. Carroll, David Glazer, Paul A. Harris, Anthony A. Philippakis, Dan M. Roden, Andrea H. Ramirez

Proceedings of the AMIA 2020, 2020

Curating Data and Communicating Quality for Impact in a FAIR World.

Robert J. Carroll, Kristin Wuichet, Charles Phillips, Michelle Holko, Allison P. Heath

Proceedings of the AMIA 2020, 2020

2019

Automated grouping of medical codes via multiview banded spectral clustering.

Luwan Zhang, Yichi Zhang, Tianrun A. Cai, Yuri Ahuja, Zeling He, Yuk-Lam Ho, Andrew Beam, Kelly Cho, Robert J. Carroll, Joshua C. Denny, Isaac S. Kohane, Katherine P. Liao, Tianxi Cai

J. Biomed. Informatics, 2019

Making work visible for electronic phenotype implementation: Lessons learned from the eMERGE network.

Ning Shang, Cong Liu, Luke V. Rasmussen, Casey N. Ta, Robert J. Carroll, Barbara Benoit, Todd Lingren, Ozan Dikilitas, Frank D. Mentch, David S. Carrell, Wei-Qi Wei, Yuan Luo, Vivian S. Gainer, Iftikhar J. Kullo, Jennifer A. Pacheco, Hakon Hakonarson, Theresa L. Walunas, Joshua C. Denny, Chunhua Weng

J. Biomed. Informatics, 2019

Facilitating phenotype transfer using a common data model.

George Hripcsak, Ning Shang, Peggy L. Peissig, Luke V. Rasmussen, Cong Liu, Barbara Benoit, Robert J. Carroll, David S. Carrell, Joshua C. Denny, Ozan Dikilitas, Vivian S. Gainer, Kayla Marie Howell, Jeffrey G. Klann, Iftikhar J. Kullo, Todd Lingren, Frank D. Mentch, Shawn N. Murphy, Karthik Natarajan, Chunhua Weng

J. Biomed. Informatics, 2019

Curating EHR data in the All of Us Research Program.

Karthik Natarajan, Robert J. Carroll, Thomas R. Campion Jr., Joan Grand, Shyam Visweswaran

Proceedings of the AMIA 2019, 2019

2018

A case study evaluating the portability of an executable computable phenotype algorithm across multiple institutions and electronic health record environments.

Jennifer A. Pacheco, Luke V. Rasmussen, Richard C. Kiefer, Thomas R. Campion Jr., Peter Speltz, Robert J. Carroll, Sarah C. Stallings, Huan Mo, Monika Ahuja, Guoqian Jiang, Eric R. LaRose, Peggy L. Peissig, Ning Shang, Barbara Benoit, Vivian S. Gainer, Kenneth Borthwick, Kathryn L. Jackson, Ambrish Sharma, Andy Yizhou Wu, Abel N. Kho, Dan M. Roden, Jyotishman Pathak, Joshua C. Denny, William K. Thompson

J. Am. Medical Informatics Assoc., 2018

Uncovering exposures responsible for birth season - disease effects: a global study.

Mary Regina Boland, Pradipta Parhi, Li Li, Riccardo Miotto, Robert J. Carroll, Usman Iqbal, Phung-Anh (Alex) Nguyen, Martijn J. Schuemie, Seng Chan You, Donahue Smith, Sean D. Mooney, Patrick B. Ryan, Yu-Chuan (Jack) Li, Rae Woong Park, Joshua C. Denny, Joel T. Dudley, George Hripcsak, Pierre Gentine, Nicholas P. Tatonetti

J. Am. Medical Informatics Assoc., 2018

Evaluating statistical approaches to leverage large clinical datasets for uncovering therapeutic and adverse medication effects.

Leena Choi, Robert J. Carroll, Cole Beck, Jonathan D. Mosley, Dan M. Roden, Joshua C. Denny, Sara L. Van Driest

Bioinform., 2018

2017

Evaluating electronic health record data sources and algorithmic approaches to identify hypertensive individuals.

Pedro L. Teixeira, Wei-Qi Wei, Robert M. Cronin, Huan Mo, Jacob P. VanHouten, Robert J. Carroll, Eric LaRose, Lisa Bastarache, S. Trent Rosenbloom, Todd L. Edwards, Dan M. Roden, Thomas A. Lasko, Richard A. Dart, Anne M. Nikolai, Peggy L. Peissig, Joshua C. Denny

J. Am. Medical Informatics Assoc., 2017

Association of BMI and Obesity Genetic Risk Score with Surgical Procedures Through a Procedure-wide Association Study.

Jamie R. Robinson, Zongyang Mou, Lisa Bastarache, Wei-Qi Wei, Robert J. Carroll, Joshua C. Denny

Proceedings of the AMIA 2017, 2017

Sub-Phenotyping of Crohn's Disease Using a Large Electronic Record Cohort.

Jamie R. Robinson, Lisa Bastarache, Robert J. Carroll, Elizabeth A. Scoville, David A. Schwartz, Joshua C. Denny

Proceedings of the AMIA 2017, 2017

HealthPro: An integrated web application for essential health data and biological specimen collection in the Precision Medicine Initiative.

Kelsey R. Mayo, Robert J. Carroll, Jason Tan, Rebecca Johnston, Celecia M. Scott, Joshua C. Denny, Paul A. Harris

Proceedings of the AMIA 2017, 2017

The Data and Research Center of the All of Us Research Program: Framework for a National Cohort Program and Research Opportunities.

Robert J. Carroll, Joshua C. Mandel, Karthik Natarajan, Scott Sutherland, Joshua C. Denny

Proceedings of the AMIA 2017, 2017

2015

A Genome- and Phenome- Wide Study of Diverticulosis.

Yoonjung Y. Joo, Jennifer A. Pacheco, Loren L. Armstrong, William K. Thompson, Robert J. Carroll, Joshua C. Denny, Peggy L. Peissig, James G. Linneman, Jyotishman Pathak, Girish N. Nadkarni, Laura Rasmussen-Torvik, M. Geoffrey Hayes, Abel N. Kho

Proceedings of the AMIA 2015, 2015

2014

R PheWAS: data analysis and plotting tools for phenome-wide association studies in the R environment.

Robert J. Carroll, Lisa Bastarache, Joshua C. Denny

Bioinform., 2014

Phenome-Wide Association Studies Using NLP-Derived Concepts.

Pedro L. Teixeira, Robert J. Carroll, Lisa Bastarache, Peter Speltz, Joshua C. Smith, Joshua C. Denny

Proceedings of the AMIA 2014, 2014

PheWAS and Genetics Define Subphenotypes in Drug Response.

Robert J. Carroll, Jeremy L. Warner, Anne E. Eyler, Charles Moore, Jayanth Doss, Katherine P. Liao, Robert M. Plenge, Joshua C. Denny

Proceedings of the AMIA 2014, 2014

2013

Using PheWAS and Natural Language Processing to Discover Clinical Associations for Congenital Chest Deformities.

Christine M. McEvoy, Robert J. Carroll, Lisa Bastarache, Wei-Qi Wei, Joshua C. Denny

Proceedings of the AMIA 2013, 2013

Open Source R Implementation of the PheWAS Methodology.

Robert J. Carroll, Lisa Bastarache, Joshua C. Denny

Proceedings of the AMIA 2013, 2013

2012

Portability of an algorithm to identify rheumatoid arthritis in electronic health records.

Robert J. Carroll, William K. Thompson, Anne E. Eyler, Arthur M. Mandelin, Tianxi Cai, Raquel M. Zink, Jennifer A. Pacheco, Chad S. Boomershine, Thomas A. Lasko, Hua Xu, Elizabeth W. Karlson, Raúl G. Pérez, Vivian S. Gainer, Shawn N. Murphy, Eric M. Ruderman, Richard M. Pope, Robert M. Plenge, Abel N. Kho, Katherine P. Liao, Joshua C. Denny

J. Am. Medical Informatics Assoc., 2012

Using PheWAS to Assess Pleiotropy of Genetic Risk Scores for Rheumatoid Arthritis and Coronary Artery Disease in the eMERGE Network.

Robert J. Carroll, Katherine P. Liao, Anne E. Eyler, Lisa Bastarache, Dana C. Crawford, Peggy L. Peissig, Jyotishman Pathak, David Carrell, Abel N. Kho, Rongling Li, Daniel R. Masys, Gail P. Jarvik, Christopher G. Chute, Rex L. Chisholm, Eric B. Larson, Catherine A. McCarty, Iftikhar J. Kullo

Proceedings of the AMIA 2012, 2012