Kentaro Tomii

According to our database1, Kentaro Tomii authored at least 16 papers between 1999 and 2020.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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PhD thesis 
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Online presence:

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Bibliography

2020
DeepECA: an end-to-end learning framework for protein contact prediction from a multiple sequence alignment.
BMC Bioinform., 2020

2019
Protein Properties.
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

Compound-protein interaction prediction with end-to-end learning of neural networks for graphs and sequences.
Bioinform., 2019

2018
Parallelization of MAFFT for large-scale multiple sequence alignments.
Bioinform., 2018

2017
Simple adjustment of the sequence weight algorithm remarkably enhances PSI-BLAST performance.
BMC Bioinform., 2017

2016
Application of the MAFFT sequence alignment program to large data - reexamination of the usefulness of chained guide trees.
Bioinform., 2016

2015
EzCatDB: the enzyme reaction database, 2015 update.
Nucleic Acids Res., 2015

PoSSuM v.2.0: data update and a new function for investigating ligand analogs and target proteins of small-molecule drugs.
Nucleic Acids Res., 2015

2014
Revisiting amino acid substitution matrices for identifying distantly related proteins.
Bioinform., 2014

2012
PoSSuM: a database of similar protein-ligand binding and putative pockets.
Nucleic Acids Res., 2012

Convergent evolution in structural elements of proteins investigated using cross profile analysis.
BMC Bioinform., 2012

2011
SAHG, a comprehensive database of predicted structures of all human proteins.
Nucleic Acids Res., 2011

2007
Predicting mostly disordered proteins by using structure-unknown protein data.
BMC Bioinform., 2007

2004
FORTE: a profile-profile comparison tool for protein fold recognition.
Bioinform., 2004

A New Variational Framework for Rigid-Body Alignment.
Proceedings of the Structural, 2004

1999
Systematic Detection of Protein Structural Motifs.
Proceedings of the Pattern Discovery in Biomolecular Data: Tools, 1999


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