According to our database1, Yasuo Tabei authored at least 53 papers between 2006 and 2020.
Legend:Book In proceedings Article PhD thesis Other
PARASOL: a hybrid approximation approach for scalable frequent itemset mining in streaming data.
J. Intell. Inf. Syst., 2020
A compressed dynamic self-index for highly repetitive text collections.
Inf. Comput., 2020
Space-Efficient Feature Maps for String Alignment Kernels.
Data Science and Engineering, 2020
Faster Queries on BWT-runs Compressed Indexes.
Succinct Trit-array Trie for Scalable Trajectory Similarity Search.
Enumeration of LCP values, LCP intervals and Maximal repeats in BWT-runs Bounded Space.
Dynamic Path-Decomposed Tries.
Statistically Discriminative Sub-trajectory Mining.
Approximate-Closed-Itemset Mining for Streaming Data Under Resource Constraint.
Network-based characterization of drug-protein interaction signatures with a space-efficient approach.
BMC Syst. Biol., 2019
Predicting drug-induced transcriptome responses of a wide range of human cell lines by a novel tensor-train decomposition algorithm.
Statistically Discriminative Sub-trajectory Mining with Multiple Testing Correction.
Proceedings of the 27th ACM SIGSPATIAL International Conference on Advances in Geographic Information Systems, 2019
LZRR: LZ77 Parsing with Right Reference.
Proceedings of the Data Compression Conference, 2019
Conversion from RLBWT to LZ77.
Proceedings of the 30th Annual Symposium on Combinatorial Pattern Matching, 2019
b-Bit Sketch Trie: Scalable Similarity Search on Integer Sketches.
Proceedings of the 2019 IEEE International Conference on Big Data (Big Data), 2019
Scalable Alignment Kernels via Space-Efficient Feature Maps.
Scalable Machine Learning on Compact Data Representations.
Proceedings of the International Symposium on Information Theory and Its Applications, 2018
Entire Regularization Path for Sparse Nonnegative Interaction Model.
Proceedings of the IEEE International Conference on Data Mining, 2018
A Dynamic Compressed Self-Index for Highly Repetitive Text Collections.
Proceedings of the 2018 Data Compression Conference, 2018
Scalable Similarity Search for Molecular Descriptors.
Proceedings of the Similarity Search and Applications - 10th International Conference, 2017
Bayesian Dynamic Mode Decomposition.
Proceedings of the Twenty-Sixth International Joint Conference on Artificial Intelligence, 2017
Simultaneous prediction of enzyme orthologs from chemical transformation patterns for de novo metabolic pathway reconstruction.
siEDM: An Efficient String Index and Search Algorithm for Edit Distance with Moves.
Scalable Partial Least Squares Regression on Grammar-Compressed Data Matrices.
Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2016
Metabolome-scale de novo pathway reconstruction using regioisomer-sensitive graph alignments.
Online Self-Indexed Grammar Compression.
Proceedings of the String Processing and Information Retrieval, 2015
Access, Rank, and Select in Grammar-compressed Strings.
Proceedings of the Algorithms - ESA 2015, 2015
Queries on LZ-Bounded Encodings.
Proceedings of the 2015 Data Compression Conference, 2015
Rank, select and access in grammar-compressed strings.
Metabolome-scale prediction of intermediate compounds in multistep metabolic pathways with a recursive supervised approach.
Improved ESP-index: A Practical Self-index for Highly Repetitive Texts.
Proceedings of the Experimental Algorithms - 13th International Symposium, 2014
Online Pattern Matching for String Edit Distance with Moves.
Proceedings of the String Processing and Information Retrieval, 2014
Finding Ambiguous Patterns on Grammar Compressed String.
Proceedings of the New Frontiers in Artificial Intelligence, 2014
Fully Online Grammar Compression in Constant Space.
Proceedings of the Data Compression Conference, 2014
Scalable prediction of compound-protein interactions using minwise hashing.
BMC Syst. Biol., 2013
KCF-S: KEGG Chemical Function and Substructure for improved interpretability and prediction in chemical bioinformatics.
BMC Syst. Biol., 2013
Inferring protein domains associated with drug side effects based on drug-target interaction network.
BMC Syst. Biol., 2013
Supervised de novo reconstruction of metabolic pathways from metabolome-scale compound sets.
Fully-Online Grammar Compression.
Proceedings of the String Processing and Information Retrieval, 2013
Succinct interval-splitting tree for scalable similarity search of compound-protein pairs with property constraints.
Proceedings of the 19th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2013
A Succinct Grammar Compression.
Proceedings of the Combinatorial Pattern Matching, 24th Annual Symposium, 2013
PoSSuM: a database of similar protein-ligand binding and putative pockets.
Nucleic Acids Res., 2012
Identification of chemogenomic features from drug-target interaction networks using interpretable classifiers.
Succinct Multibit Tree: Compact Representation of Multibit Trees by Using Succinct Data Structures in Chemical Fingerprint Searches.
Proceedings of the Algorithms in Bioinformatics - 12th International Workshop, 2012
Variable-Length Codes for Space-Efficient Grammar-Based Compression.
Proceedings of the String Processing and Information Retrieval, 2012
Kernel-based Similarity Search in Massive Graph Databases with Wavelet Trees.
Proceedings of the Eleventh SIAM International Conference on Data Mining, 2011
LGM: Mining Frequent Subgraphs from Linear Graphs.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2011
Single versus Multiple Sorting in All Pairs Similarity Search.
Proceedings of the 2nd Asian Conference on Machine Learning, 2010
A local multiple alignment method for detection of non-coding RNA sequences.
Software.ncrna.org: web servers for analyses of RNA sequences.
Nucleic Acids Res., 2008
A fast structural multiple alignment method for long RNA sequences.
BMC Bioinform., 2008
Murlet: a practical multiple alignment tool for structural RNA sequences.
SCARNA: fast and accurate structural alignment of RNA sequences by matching fixed-length stem fragments.