Kengo Kinoshita

Orcid: 0000-0003-3453-2171

According to our database1, Kengo Kinoshita authored at least 34 papers between 2004 and 2023.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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On csauthors.net:

Bibliography

2023
COXPRESdb v8: an animal gene coexpression database navigating from a global view to detailed investigations.
Nucleic Acids Res., January, 2023

Statistical Modeling of Subjective Sleep Quality.
Proceedings of the 45th Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2023

2021
jMorp updates in 2020: large enhancement of multi-omics data resources on the general Japanese population.
Nucleic Acids Res., 2021

2020
A genotype imputation method for de-identified haplotype reference information by using recurrent neural network.
PLoS Comput. Biol., 2020

Theoretical characterisation of strand cross-correlation in ChIP-seq.
BMC Bioinform., 2020

2019
COXPRESdb v7: a gene coexpression database for 11 animal species supported by 23 coexpression platforms for technical evaluation and evolutionary inference.
Nucleic Acids Res., 2019

Relationship between Dynamics of Physiological Signals and Subjective Quality of Life and Its Lifestyle Dependency.
Proceedings of the 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2019

2018
jMorp: Japanese Multi Omics Reference Panel.
Nucleic Acids Res., 2018

De novo profile generation based on sequence context specificity with the long short-term memory network.
BMC Bioinform., 2018

Matataki: an ultrafast mRNA quantification method for large-scale reanalysis of RNA-Seq data.
BMC Bioinform., 2018

2017
Security controls in an integrated Biobank to protect privacy in data sharing: rationale and study design.
BMC Medical Informatics Decis. Mak., 2017

2016
NCMine: Core-peripheral based functional module detection using near-clique mining.
Bioinform., 2016

Discrepancies between human DNA, mRNA and protein reference sequences and their relation to single nucleotide variants in the human population.
Database J. Biol. Databases Curation, 2016

2015
COXPRESdb in 2015: coexpression database for animal species by DNA-microarray and RNAseq-based expression data with multiple quality assessment systems.
Nucleic Acids Res., 2015

2014
GIANT: pattern analysis of molecular interactions in 3D structures of protein-small ligand complexes.
BMC Bioinform., 2014

2013
COXPRESdb: a database of comparative gene coexpression networks of eleven species for mammals.
Nucleic Acids Res., 2013

Comprehensive Classification and Diversity Assessment of Atomic Contacts in Protein-Small Ligand Interactions.
J. Chem. Inf. Model., 2013

2011
COXPRESdb: a database to compare gene coexpression in seven model animals.
Nucleic Acids Res., 2011

SAHG, a comprehensive database of predicted structures of all human proteins.
Nucleic Acids Res., 2011

2010
Ligand-binding site prediction of proteins based on known fragment-fragment interactions.
Bioinform., 2010

2009
ATTED-II provides coexpressed gene networks for Arabidopsis.
Nucleic Acids Res., 2009

PiSite: a database of protein interaction sites using multiple binding states in the PDB.
Nucleic Acids Res., 2009

Multi-dimensional correlations for gene coexpression and application to the large-scale data of Arabidopsis.
Bioinform., 2009

2008
COXPRESdb: a database of coexpressed gene networks in mammals.
Nucleic Acids Res., 2008

Prediction of disordered regions in proteins based on the meta approach.
Bioinform., 2008

Protein structure databases with new web services for structural biology and biomedical research.
Briefings Bioinform., 2008

2007
ATTED-II: a database of co-expressed genes and <i>cis</i> elements for identifying co-regulated gene groups in <i>Arabidopsis</i>.
Nucleic Acids Res., 2007

eF-seek: prediction of the functional sites of proteins by searching for similar electrostatic potential and molecular surface shape.
Nucleic Acids Res., 2007

PrDOS: prediction of disordered protein regions from amino acid sequence.
Nucleic Acids Res., 2007

2006
PreBI: prediction of biological interfaces of proteins in crystals.
Nucleic Acids Res., 2006

DBTGR: a database of tunicate promoters and their regulatory elements.
Nucleic Acids Res., 2006

2005
PreDs: a server for predicting dsDNA-binding site on protein molecular surfaces.
Bioinform., 2005

P-cats: prediction of catalytic residues in proteins from their tertiary structures.
Bioinform., 2005

2004
eF-site and PDBjViewer: database and viewer for protein functional sites.
Bioinform., 2004


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