Kana Shimizu

According to our database, Kana Shimizu authored at least 29 papers between 2002 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Efficient Privacy Preserving Range Query Using Segment Tree.

Shusuke Shirotake, Kana Shimizu

Proceedings of the 58th Annual Conference on Information Sciences and Systems, 2024

2023

Efficient Colored de Bruijn Graph for Indexing Reads.

Nozomi Hasegawa, Kana Shimizu

J. Comput. Biol., May, 2023

2022

Efficient privacy-preserving variable-length substring match for genome sequence.

Yoshiki Nakagawa, Satsuya Ohata, Kana Shimizu

Algorithms Mol. Biol., 2022

Private Evaluation of a Decision Tree Based on Secret Sharing.

Mohammad Nabil Ahmed, Kana Shimizu

Proceedings of the Information Security and Cryptology - ICISC 2022, 2022

2020

Differentially private cross-silo federated learning.

Mikko A. Heikkilä, Antti Koskela, Kana Shimizu, Samuel Kaski, Antti Honkela

CoRR, 2020

2019

Secure Wavelet Matrix: Alphabet-Friendly Privacy-Preserving String Search for Bioinformatics.

Hiroki Sudo, Masanobu Jimbo, Koji Nuida, Kana Shimizu

IEEE ACM Trans. Comput. Biol. Bioinform., 2019

An Efficient Private Evaluation of a Decision Graph.

Hiroki Sudo, Koji Nuida, Kana Shimizu

IACR Cryptol. ePrint Arch., 2019

A playful tool for predicting protein-protein docking.

Keren Jiang, Di Zhang, Tsubasa Iino, Risa Kimura, Tatsuo Nakajima, Kana Shimizu, Masahito Ohue, Yutaka Akiyama

Proceedings of the 18th International Conference on Mobile and Ubiquitous Multimedia, 2019

2018

Simultaneous High-speed and Polarization-Independent Switching Operation of 2x2 Silicon Mach-Zehnder-Type Optical Switch.

Kana Shimizu, Tomohiro Shirai, Yuichi Matsushima, Hiroshi Ishikawa, Katsuyuki Utaka

Proceedings of the Photonics in Switching and Computing, 2018

Secure Division Protocol and Applications to Privacy-preserving Chi-squared Tests.

Hiraku Morita, Nuttapong Attrapadung, Satsuya Ohata, Koji Nuida, Shota Yamada, Kana Shimizu, Goichiro Hanaoka, Kiyoshi Asai

Proceedings of the International Symposium on Information Theory and Its Applications, 2018

Efficient Two-level Homomorphic Encryption in Prime-order Bilinear Groups and A Fast Implementation in WebAssembly.

Nuttapong Attrapadung, Goichiro Hanaoka, Shigeo Mitsunari, Yusuke Sakai, Kana Shimizu, Tadanori Teruya

Proceedings of the 2018 on Asia Conference on Computer and Communications Security, 2018

2017

Differentially Private Bayesian Learning on Distributed Data.

Mikko A. Heikkilä, Yusuke Okimoto, Samuel Kaski, Kana Shimizu, Antti Honkela

CoRR, 2017

Differentially private Bayesian learning on distributed data.

Mikko A. Heikkilä, Eemil Lagerspetz, Samuel Kaski, Kana Shimizu, Sasu Tarkoma, Antti Honkela

Proceedings of the Advances in Neural Information Processing Systems 30: Annual Conference on Neural Information Processing Systems 2017, 2017

2016

Efficient privacy-preserving string search and an application in genomics.

Kana Shimizu, Koji Nuida, Gunnar Rätsch

Bioinform., 2016

Privacy-preserving string search for genome sequences with FHE bootstrapping optimization.

Yu Ishimaki, Hiroki Imabayashi, Kana Shimizu, Hayato Yamana

Proceedings of the 2016 IEEE International Conference on Big Data (IEEE BigData 2016), 2016

2015

Privacy-preserving search for chemical compound databases.

Kana Shimizu, Koji Nuida, Hiromi Arai, Shigeo Mitsunari, Nuttapong Attrapadung, Michiaki Hamada, Koji Tsuda, Takatsugu Hirokawa, Jun Sakuma, Goichiro Hanaoka, Kiyoshi Asai

BMC Bioinform., December, 2015

On Limitations and Alternatives of Privacy-Preserving Cryptographic Protocols for Genomic Data.

Tadanori Teruya, Koji Nuida, Kana Shimizu, Goichiro Hanaoka

Proceedings of the Advances in Information and Computer Security, 2015

2014

Reference-free prediction of rearrangement breakpoint reads.

Edward Wijaya, Kana Shimizu, Kiyoshi Asai, Michiaki Hamada

Bioinform., 2014

2012

PoSSuM: a database of similar protein-ligand binding and putative pockets.

Jun-Ichi Ito, Yasuo Tabei, Kana Shimizu, Koji Tsuda, Kentaro Tomii

Nucleic Acids Res., 2012

2011

SAHG, a comprehensive database of predicted structures of all human proteins.

Chie Motono, Junichi Nakata, Ryotaro Koike, Kana Shimizu, Matsuyuki Shirota, Takayuki Amemiya, Kentaro Tomii, Nozomi Nagano, Naofumi Sakaya, Kiyotaka Misoo, Miwa Sato, Akinori Kidera, Hidekazu Hiroaki, Tsuyoshi Shirai, Kengo Kinoshita, Tamotsu Noguchi, Motonori Ota

Nucleic Acids Res., 2011

SlideSort: all pairs similarity search for short reads.

Kana Shimizu, Koji Tsuda

Bioinform., 2011

2010

POODLE-I: Disordered Region Prediction by Integrating POODLE Series and Structural Information Predictors Based on a Workflow Approach.

Shuichi Hirose, Kana Shimizu, Tamotsu Noguchi

Silico Biol., 2010

2007

Predicting mostly disordered proteins by using structure-unknown protein data.

Kana Shimizu, Yoichi Muraoka, Shuichi Hirose, Kentaro Tomii, Tamotsu Noguchi

BMC Bioinform., 2007

POODLE-S: web application for predicting protein disorder by using physicochemical features and reduced amino acid set of a position-specific scoring matrix.

Kana Shimizu, Shuichi Hirose, Tamotsu Noguchi

Bioinform., 2007

POODLE-L: a two-level SVM prediction system for reliably predicting long disordered regions.

Shuichi Hirose, Kana Shimizu, Satoru Kanai, Yutaka Kuroda, Tamotsu Noguchi

Bioinform., 2007

2006

Angle: a Sequencing Errors Resistant Program for Predicting Protein Coding Regions in Unfinished Cdna.

Kana Shimizu, Jun Adachi, Yoichi Muraoka

J. Bioinform. Comput. Biol., 2006

2005

Feature Selection Based on Physicochemical Properties of Redefined N-term Region and C-term Regions for Predicting Disorder.

Kana Shimizu, Yoichi Muraoka, Shuichi Hirose, Tamotsu Noguchi

Proceedings of the 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2005

2002

The Design Method of a Melody Retrieval System on Parallelized Computers.

Tomonari Sonoda, Toshiya Ikenaga, Kana Shimizu, Yoichi Muraoka

Proceedings of the Second International Conference on WEB Delivering of Music, 2002

A melody retrieval system on parallelized computers.

Tomonari Sonoda, Toshiya Ikenaga, Kana Shimizu, Yoichi Muraoka

Proceedings of the Entertainment Computing: Technologies and Applications, 2002