Lianyi Han

According to our database, Lianyi Han authored at least 25 papers between 2003 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

RVvictor: Virus RNA-directed molecular interactions for RNA virus infection.

Kuerbannisha Amahong, Wei Zhang, Yu-Hong Liu, Teng Li, Shijie Huang, Lianyi Han, Lin Tao, Feng Zhu

Comput. Biol. Medicine, February, 2024

2023

CovInter: interaction data between coronavirus RNAs and host proteins.

Kuerbannisha Amahong, Wei Zhang, Ying Zhou, Song Zhang, Jiayi Yin, Fengcheng Li, Hong-Quan Xu, Tian-Ci Yan, Zi-Xuan Yue, Yu-Hong Liu, Tingjun Hou, Yunqing Qiu, Lin Tao, Lianyi Han, Feng Zhu

Nucleic Acids Res., January, 2023

2022

MEGAN: Memory Enhanced Graph Attention Network for Space-Time Video Super-Resolution.

Chenyu You, Lianyi Han, Aosong Feng, Ruihan Zhao, Hui Tang, Wei Fan

Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, 2022

2021

Object-Guided Instance Segmentation With Auxiliary Feature Refinement for Biological Images.

Jingru Yi, Pengxiang Wu, Hui Tang, Bo Liu, Qiaoying Huang, Hui Qu, Lianyi Han, Wei Fan, Daniel J. Hoeppner, Dimitris N. Metaxas

IEEE Trans. Medical Imaging, 2021

2020

Object-Guided Instance Segmentation for Biological Images.

Jingru Yi, Hui Tang, Pengxiang Wu, Bo Liu, Daniel J. Hoeppner, Dimitris N. Metaxas, Lianyi Han, Wei Fan

Proceedings of the Thirty-Fourth AAAI Conference on Artificial Intelligence, 2020

2017

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.

Aron Marchler-Bauer, Bo Yu, Lianyi Han, Jane He, Christopher J. Lanczycki, Shennan Lu, Farideh Chitsaz, Myra K. Derbyshire, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, Fu Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Zhouxi Wang, Roxanne A. Yamashita, Dachuan Zhang, Chanjuan Zheng, Lewis Y. Geer, Stephen H. Bryant

Nucleic Acids Res., 2017

2016

PubChem Substance and Compound databases.

Sunghwan Kim, Paul A. Thiessen, Evan Bolton, Jie Chen, Gang Fu, Asta Gindulyte, Lianyi Han, Jane He, Siqian He, Benjamin A. Shoemaker, Jiyao Wang, Bo Yu, Jian Zhang, Stephen H. Bryant

Nucleic Acids Res., 2016

2015

Target enhanced 2D similarity search by using explicit biological activity annotations and profiles.

Xiang Yu, Lewis Y. Geer, Lianyi Han, Stephen H. Bryant

J. Cheminformatics, 2015

PubChem structure-activity relationship (SAR) clusters.

Sunghwan Kim, Lianyi Han, Bo Yu, Volker Hähnke, Evan Bolton, Stephen H. Bryant

J. Cheminformatics, 2015

2012

PubChem's BioAssay Database.

Yanli Wang, Jewen Xiao, Tugba O. Suzek, Jian Zhang, Jiyao Wang, Zhigang Zhou, Lianyi Han, Karen Karapetyan, Svetlana Dracheva, Benjamin A. Shoemaker, Evan Bolton, Asta Gindulyte, Stephen H. Bryant

Nucleic Acids Res., 2012

2011

PubChem3D: a new resource for scientists.

Evan Bolton, Jie Chen, Sunghwan Kim, Lianyi Han, Siqian He, Wenyao Shi, Vahan Simonyan, Yan Sun, Paul A. Thiessen, Jiyao Wang, Bo Yu, Jian Zhang, Stephen H. Bryant

J. Cheminformatics, 2011

2010

Update of TTD: Therapeutic Target Database.

Feng Zhu, Bu-Cong Han, Pankaj Kumar, Xianghui Liu, Xiao Hua Ma, XiaoNa Wei, Lu Huang, Yangfan Guo, Lianyi Han, Chanjuan Zheng, Yu Zong Chen

Nucleic Acids Res., 2010

The NCBI BioSystems database.

Lewis Y. Geer, Aron Marchler-Bauer, Renata C. Geer, Lianyi Han, Jane He, Siqian He, Chunlei Liu, Wenyao Shi, Stephen H. Bryant

Nucleic Acids Res., 2010

The Text-mining based PubChem Bioassay neighboring analysis.

Lianyi Han, Tugba O. Suzek, Yanli Wang, Steve H. Bryant

BMC Bioinform., 2010

2009

A survey of across-target bioactivity results of small molecules in PubChem.

Lianyi Han, Yanli Wang, Stephen H. Bryant

Bioinform., 2009

2008

Developing and validating predictive decision tree models from mining chemical structural fingerprints and high-throughput screening data in PubChem.

Lianyi Han, Yanli Wang, Stephen H. Bryant

BMC Bioinform., 2008

2007

PharmGED: Pharmacogenetic Effect Database.

C. J. Zheng, Lianyi Han, B. Xie, C. Y. Liew, Serene A. K. Ong, J. Cui, H. L. Zhang, Z. Q. Tang, S. H. Gan, L. Jiang, Yu Zong Chen

Nucleic Acids Res., 2007

2006

PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence.

Ze-Rong Li, Honghuang Lin, Lianyi Han, L. Jiang, X. Chen, Yu Zong Chen

Nucleic Acids Res., 2006

PEARLS: Program for Energetic Analysis of Receptor-Ligand System.

Lianyi Han, Honghuang Lin, Ze-Rong Li, C. J. Zheng, Zhi Wei Cao, B. Xie, Yu Zong Chen

J. Chem. Inf. Model., 2006

Prediction of the functional class of metal-binding proteins from sequence derived physicochemical properties by support vector machine approach.

H. H. Lin, Lianyi Han, H. L. Zhang, C. J. Zheng, B. Xie, Zhi Wei Cao, Yu Zong Chen

BMC Bioinform., 2006

Prediction of Transmembrane Proteins from Their Primary Sequence by Support Vector Machine Approach.

Congzhong Cai, Qianfei Yuan, Hanguang Xiao, Xinghua Liu, Lianyi Han, Yu Zong Chen

Proceedings of the Computational Intelligence and Bioinformatics, 2006

2004

MoViES: molecular vibrations evaluation server for analysis of fluctuational dynamics of proteins and nucleic acids.

Zhi Wei Cao, Ying Xue, Lianyi Han, B. Xie, H. Zhou, C. J. Zheng, Honghuang Lin, Yu Zong Chen

Nucleic Acids Res., 2004

TRMP: a database of therapeutically relevant multiple pathways.

C. J. Zheng, H. Zhou, B. Xie, Lianyi Han, Chun Wei Yap, Yu Zong Chen

Bioinform., 2004

2003

KDBI: Kinetic Data of Bio-molecular Interactions database.

Zhi Liang Ji, X. Chen, C. J. Zheng, L. X. Yao, Lianyi Han, Wee Kiang Yeo, P. C. Chung, H. S. Puy, Y. T. Tay, A. Muhammad, Yu Zong Chen

Nucleic Acids Res., 2003

SVM-Prot: web-based support vector machine software for functional classification of a protein from its primary sequence.

Congzhong Cai, Lianyi Han, Zhi Liang Ji, X. Chen, Yu Zong Chen

Nucleic Acids Res., 2003