Dachuan Zhang

According to our database, Dachuan Zhang authored at least 32 papers between 2005 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2023

SynBioTools: a one-stop facility for searching and selecting synthetic biology tools.

Pengli Cai, Sheng Liu, Dachuan Zhang, Huadong Xing, Mengying Han, Dongliang Liu, Linlin Gong, Qian-Nan Hu

BMC Bioinform., December, 2023

The conserved domain database in 2023.

Jiyao Wang, Farideh Chitsaz, Myra K. Derbyshire, Noreen R. Gonzales, Marc Gwadz, Shennan Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Mingzhang Yang, Dachuan Zhang, Chanjuan Zheng, Christopher J. Lanczycki, Aron Marchler-Bauer

Nucleic Acids Res., January, 2023

2022

BioBulkFoundary: a customized webserver for exploring biosynthetic potentials of bulk chemicals.

Dandan Sun, Shaozhen Ding, Pengli Cai, Dachuan Zhang, Mengying Han, Qian-Nan Hu

Bioinform., November, 2022

Integrating a deep forest algorithm with vector-based cellular automata for urban land change simulation.

Haoming Zhuang, Xiaoping Liu, Yuchao Yan, Dachuan Zhang, Jialyu He, Jinqiang He, Xinchang Zhang, Honghui Zhang, Manchun Li

Trans. GIS, 2022

Simulating multiple urban land use changes by integrating transportation accessibility and a vector-based cellular automata: a case study on city of Toronto.

Xiaocong Xu, Dachuan Zhang, Xiaoping Liu, Jinpei Ou, Xinxin Wu

Geo spatial Inf. Sci., 2022

Convolutional neural network with coarse-to-fine resolution fusion and residual learning structures for cross-modality image synthesis.

Guoqing Wu, Xi Chen, Zhifeng Shi, Dachuan Zhang, Zhaoyu Hu, Ying Mao, Yuanyuan Wang, Jinhua Yu

Biomed. Signal Process. Control., 2022

Contrastive learning-based computational histopathology predict differential expression of cancer driver genes.

Haojie Huang, Gongming Zhou, Xuejun Liu, Lei Deng, Chen Wu, Dachuan Zhang, Hui Liu

Briefings Bioinform., 2022

2021

ChemHub: a knowledgebase of functional chemicals for synthetic biology studies.

Mengying Han, Dachuan Zhang, Shaozhen Ding, Yu Tian, Xingxiang Cheng, Le Yuan, Dandan Sun, Dongliang Liu, Linlin Gong, Cancan Jia, Pengli Cai, Weizhong Tu, Junni Chen, Qian-Nan Hu

Bioinform., November, 2021

Accurate Estimation of the Proportion of Mixed Land Use at the Street-Block Level by Integrating High Spatial Resolution Images and Geospatial Big Data.

Jialyu He, Xia Li, Penghua Liu, Xinxin Wu, Jinbao Zhang, Dachuan Zhang, Xiaojuan Liu, Yao Yao

IEEE Trans. Geosci. Remote. Sens., 2021

IFoodCloud: A Platform for Real-time Sentiment Analysis of Public Opinion about Food Safety in China.

Dachuan Zhang, Haoyang Zhang, Zhisheng Wei, Yan Li, Zhiheng Mao, Chunmeng He, Haorui Ma, Xin Zeng, Xiaoling Xie, Xingran Kou, Bingwen Zhang

CoRR, 2021

SARS2020: an integrated platform for identification of novel coronavirus by a consensus sequence-function model.

Dachuan Zhang, Tong Zhang, Sheng Liu, Dandan Sun, Shaozhen Ding, Xingxiang Cheng, Pengli Cai, Ailin Ren, Mengying Han, Dongliang Liu, Cancan Jia, Linlin Gong, Rui Zhang, Huadong Xing, Weizhong Tu, Junni Chen, Qian-Nan Hu

Bioinform., 2021

Transcriptor: a comprehensive platform for annotation of the enzymatic functions of transcripts.

Ailin Ren, Dachuan Zhang, Yu Tian, Pengli Cai, Tong Zhang, Qian-Nan Hu

Bioinform., 2021

Multi-Field Synergy Manipulating Soft Polymeric Hydrogel Transformers.

Dachuan Zhang, Jiawei Zhang, Yukun Jian, Baoyi Wu, Huizhen Yan, Huanhuan Lu, Shuxin Wei, Si Wu, Qunji Xue, Tao Chen

Adv. Intell. Syst., 2021

2020

CDD/SPARCLE: the conserved domain database in 2020.

Shennan Lu, Jiyao Wang, Farideh Chitsaz, Myra K. Derbyshire, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, Gabriele H. Marchler, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Mingzhang Yang, Dachuan Zhang, Chanjuan Zheng, Christopher J. Lanczycki, Aron Marchler-Bauer

Nucleic Acids Res., 2020

novoPathFinder: a webserver of designing novel-pathway with integrating GEM-model.

Shaozhen Ding, Yu Tian, Pengli Cai, Dachuan Zhang, Xingxiang Cheng, Dandan Sun, Le Yuan, Junni Chen, Weizhong Tu, Dong-Qing Wei, Qian-Nan Hu

Nucleic Acids Res., 2020

iCn3D, a web-based 3D viewer for sharing 1D/2D/3D representations of biomolecular structures.

Jiyao Wang, Philippe Youkharibache, Dachuan Zhang, Christopher J. Lanczycki, Renata C. Geer, Thomas Madej, Lon Phan, Minghong Ward, Shennan Lu, Gabriele H. Marchler, Yanli Wang, Stephen H. Bryant, Lewis Y. Geer, Aron Marchler-Bauer

Bioinform., 2020

BCSExplorer: a customized biosynthetic chemical space explorer with multifunctional objective function analysis.

Yu Tian, Ling Wu, Le Yuan, Shaozhen Ding, Fu Chen, Tong Zhang, Ailin Ren, Dachuan Zhang, Weizhong Tu, Junni Chen, Qian-Nan Hu

Bioinform., 2020

RxnBLAST: molecular scaffold and reactive chemical environment feature extractor for biochemical reactions.

Xingxiang Cheng, Dandan Sun, Dachuan Zhang, Yu Tian, Shaozhen Ding, Pengli Cai, Qian-Nan Hu

Bioinform., 2020

EnzyMine: a comprehensive database for enzyme function annotation with enzymatic reaction chemical feature.

Dandan Sun, Xingxiang Cheng, Yu Tian, Shaozhen Ding, Dachuan Zhang, Pengli Cai, Qian-Nan Hu

Database J. Biol. Databases Curation, 2020

2017

Friction Compensation Based on Time-Delay Control and Internal Model Control for a Gimbal System in Magnetically Suspended CMG.

Peiling Cui, Dachuan Zhang, Shan Yang, Haitao Li

IEEE Trans. Ind. Electron., 2017

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.

Aron Marchler-Bauer, Bo Yu, Lianyi Han, Jane He, Christopher J. Lanczycki, Shennan Lu, Farideh Chitsaz, Myra K. Derbyshire, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, Fu Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Zhouxi Wang, Roxanne A. Yamashita, Dachuan Zhang, Chanjuan Zheng, Lewis Y. Geer, Stephen H. Bryant

Nucleic Acids Res., 2017

Simulation of Urban Expansion and Farmland Loss in China by Integrating Cellular Automata and Random Forest.

Yao Yao, Xiaoping Liu, Dachuan Zhang, Zhaotang Liang, Yatao Zhang

CoRR, 2017

2015

CDD: NCBI's conserved domain database.

Aron Marchler-Bauer, Myra K. Derbyshire, Noreen R. Gonzales, Shennan Lu, Farideh Chitsaz, Lewis Y. Geer, Renata C. Geer, Jane He, Marc Gwadz, David I. Hurwitz, Christopher J. Lanczycki, Fu Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Zhouxi Wang, Roxanne A. Yamashita, Dachuan Zhang, Chanjuan Zheng, Stephen H. Bryant

Nucleic Acids Res., 2015

2014

MMDB and VAST+: tracking structural similarities between macromolecular complexes.

Thomas Madej, Christopher J. Lanczycki, Dachuan Zhang, Paul A. Thiessen, Renata C. Geer, Aron Marchler-Bauer, Stephen H. Bryant

Nucleic Acids Res., 2014

2013

CDD: conserved domains and protein three-dimensional structure.

Aron Marchler-Bauer, Chanjuan Zheng, Farideh Chitsaz, Myra K. Derbyshire, Lewis Y. Geer, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, Christopher J. Lanczycki, Fu Lu, Shennan Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Dachuan Zhang, Stephen H. Bryant

Nucleic Acids Res., 2013

2012

IBIS (Inferred Biomolecular Interaction Server) reports, predicts and integrates multiple types of conserved interactions for proteins.

Benjamin A. Shoemaker, Dachuan Zhang, Manoj Tyagi, Ratna R. Thangudu, Jessica H. Fong, Aron Marchler-Bauer, Stephen H. Bryant, Thomas Madej, Anna R. Panchenko

Nucleic Acids Res., 2012

MMDB: 3D structures and macromolecular interactions.

Thomas Madej, Kenneth J. Addess, Jessica H. Fong, Lewis Y. Geer, Renata C. Geer, Christopher J. Lanczycki, Chunlei Liu, Shennan Lu, Aron Marchler-Bauer, Anna R. Panchenko, Jie Chen, Paul A. Thiessen, Yanli Wang, Dachuan Zhang, Stephen H. Bryant

Nucleic Acids Res., 2012

2011

CDD: a Conserved Domain Database for the functional annotation of proteins.

Aron Marchler-Bauer, Shennan Lu, John B. Anderson, Farideh Chitsaz, Myra K. Derbyshire, Carol DeWeese-Scott, Jessica H. Fong, Lewis Y. Geer, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Christopher J. Lanczycki, Fu Lu, Gabriele H. Marchler, Mikhail Mullokandov, Marina V. Omelchenko, Cynthia L. Robertson, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Dachuan Zhang, Naigong Zhang, Chanjuan Zheng, Stephen H. Bryant

Nucleic Acids Res., 2011

2010

Inferred Biomolecular Interaction Server - a web server to analyze and predict protein interacting partners and binding sites.

Benjamin A. Shoemaker, Dachuan Zhang, Ratna R. Thangudu, Manoj Tyagi, Jessica H. Fong, Aron Marchler-Bauer, Stephen H. Bryant, Tom Madej, Anna R. Panchenko

Nucleic Acids Res., 2010

2009

CDD: specific functional annotation with the Conserved Domain Database.

Aron Marchler-Bauer, John B. Anderson, Farideh Chitsaz, Myra K. Derbyshire, Carol DeWeese-Scott, Jessica H. Fong, Lewis Y. Geer, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, Siqian He, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Fu Lu, Shennan Lu, Gabriele H. Marchler, Mikhail Mullokandov, James S. Song, Asba Tasneem, Narmada Thanki, Roxanne A. Yamashita, Dachuan Zhang, Naigong Zhang, Stephen H. Bryant

Nucleic Acids Res., 2009

2007

CDD: a conserved domain database for interactive domain family analysis.

Aron Marchler-Bauer, John B. Anderson, Myra K. Derbyshire, Carol DeWeese-Scott, Noreen R. Gonzales, Marc Gwadz, Luning Hao, Siqian He, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Dmitri M. Krylov, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Fu Lu, Shennan Lu, Gabriele H. Marchler, Mikhail Mullokandov, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Jodie J. Yin, Dachuan Zhang, Stephen H. Bryant

Nucleic Acids Res., 2007

2005

CDD: a Conserved Domain Database for protein classification.

Aron Marchler-Bauer, John B. Anderson, Praveen F. Cherukuri, Carol DeWeese-Scott, Lewis Y. Geer, Marc Gwadz, Siqian He, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Fu Lu, Gabriele H. Marchler, Mikhail Mullokandov, Benjamin A. Shoemaker, Vahan Simonyan, James S. Song, Paul A. Thiessen, Roxanne A. Yamashita, Jodie J. Yin, Dachuan Zhang, Stephen H. Bryant

Nucleic Acids Res., 2005