Makiko Suwa

According to our database, Makiko Suwa authored at least 15 papers between 2001 and 2015.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2015

Development of a Machine Learning Method to Predict Membrane Protein-Ligand Binding Residues Using Basic Sequence Information.

M. Xavier Suresh, M. Michael Gromiha, Makiko Suwa

Adv. Bioinformatics, 2015

2009

TMFunction: database for functional residues in membrane proteins.

M. Michael Gromiha, Yukimitsu Yabuki, M. Xavier Suresh, A. Mary Thangakani, Makiko Suwa, Kazuhiko Fukui

Nucleic Acids Res., 2009

2008

TMBETADISC-RBF: Discrimination of beta-barrel membrane proteins using RBF networks and PSSM profiles.

Yu-Yen Ou, M. Michael Gromiha, Shu-An Chen, Makiko Suwa

Comput. Biol. Chem., 2008

Neural network based prediction of protein structure and Function: Comparison with other machine learning methods.

M. Michael Gromiha, Shandar Ahmad, Makiko Suwa

Proceedings of the International Joint Conference on Neural Networks, 2008

2007

TMBETA-GENOME: database for annotated ß-barrel membrane proteins in genomic sequences.

M. Michael Gromiha, Yukimitsu Yabuki, Srinesh Kundu, Sivasundaram Suharnan, Makiko Suwa

Nucleic Acids Res., 2007

TMB Finding Pipeline: Novel Approach for Detecting β-Barrel Membrane Proteins in Genomic Sequences.

M. Michael Gromiha, Yukimitsu Yabuki, Makiko Suwa

J. Chem. Inf. Model., 2007

2006

Automated classification of alternative splicing and transcriptional initiation and construction of visual database of classified patterns.

Hideki Nagasaki, Masanori Arita, Tatsuya Nishizawa, Makiko Suwa, Osamu Gotoh

Bioinform., 2006

2005

GRIFFIN: a system for predicting GPCR-G-protein coupling selectivity using a support vector machine and a hidden Markov model.

Yukimitsu Yabuki, Takahiko Muramatsu, Takatsugu Hirokawa, Hidehito Mukai, Makiko Suwa

Nucleic Acids Res., 2005

TMBETA-NET: discrimination and prediction of membrane spanning ß-strands in outer membrane proteins.

M. Michael Gromiha, Shandar Ahmad, Makiko Suwa

Nucleic Acids Res., 2005

Application of residue distribution along the sequence for discriminating outer membrane proteins.

M. Michael Gromiha, Shandar Ahmad, Makiko Suwa

Comput. Biol. Chem., 2005

Discrimination of outer membrane proteins using support vector machines.

Keun-Joon Park, M. Michael Gromiha, Paul Horton, Makiko Suwa

Bioinform., 2005

A simple statistical method for discriminating outer membrane proteins with better accuracy.

M. Michael Gromiha, Makiko Suwa

Bioinform., 2005

2004

Neural network-based prediction of transmembrane -strand segments in outer membrane proteins.

M. Michael Gromiha, Shandar Ahmad, Makiko Suwa

J. Comput. Chem., 2004

GENIUS II: a high-throughput database system for linking ORFs in complete genomes to known protein three-dimensional structures.

Yukimitsu Yabuki, Yuri Mukai, Mark B. Swindells, Makiko Suwa

Bioinform., 2004

2001

HUNT: launch of a full-length cDNA database from the Helix Research Institute.

Henrik T. Yudate, Makiko Suwa, Ryotaro Irie, Hiroshi Matsui, Tetsuo Nishikawa, Yoshitaka Nakamura, Daisuke Yamaguchi, Zhang Zhi Peng, Tomoyuki Yamamoto, Keiichi Nagai, Koji Hayashi, Tetsuji Otsuki, Tomoyasu Sugiyama, Toshio Ota, Yutaka Suzuki, Sumio Sugano, Takao Isogai, Yasuhiko Masuho

Nucleic Acids Res., 2001